RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 RHOCP08134 193 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 FECHP22830 423 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 NTSR1P30989 418 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 L1CAMP32004 1257 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 KIR2DL1P43626 348 aaPredicted RBP12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 NOP2P46087 812 aaKnown RBP12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 ST8SIA6P61647 398 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 KRT83P78385 493 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 CSTF1Q05048 431 aaKnown RBP12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 BOLA3Q53S33 107 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 FSCBQ5H9T9 825 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 C6orf118Q5T5N4 469 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 RNF219Q5W0B1 726 aaPredicted RBP12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 MBLAC2Q68D91 279 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 SYT13Q7L8C5 426 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 TFAP2DQ7Z6R9 452 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 PSTKQ8IV42 348 aaKnown RBP12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 IL17RCQ8NAC3 791 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 TXNDC5Q8NBS9 432 aaKnown RBP12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 WFDC5Q8TCV5 224 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 MUC3BQ9H195 1237 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 RETREG1Q9H6L5 497 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 DONSONQ9NYP3 566 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 MPP6Q9NZW5 540 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 FBXO4Q9UKT5 387 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 MMP17Q9ULZ9 603 aa12.44□□□□□ -0.42
CSNK1E-213ENST00000495232 TMEM110-MUSTN1A8MSY1 372 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 DAPK3O43293 454 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 CNTN5O94779 1100 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 LRIG2O94898 1065 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 PROSCO94903 275 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 ASLP04424 464 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 HNRNPLP14866 589 aaKnown RBP eCLIP12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 EPHB2P29323 1055 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 HTR7P34969 479 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 NNMTP40261 264 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 CSKP41240 450 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 ARHGAP25P42331 645 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 PTPN5P54829 565 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 NRLP54845 237 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 TPI1P60174 286 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 SATB1Q01826 763 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 MESDQ14696 234 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 FNDC3BQ53EP0 1204 aaKnown RBP12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 ALFQ53S48 1182 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 PITRM1Q5JRX3 1037 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 ZFYVE27Q5T4F4 411 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 EGFLAMQ63HQ2 1017 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 PKN3Q6P5Z2 889 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 SERPINA13PQ6UXR4 307 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 KIAA0907Q7Z7F0 614 aaPredicted RBP12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 KIAA1328Q86T90 577 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 SETD3Q86TU7 594 aaPredicted RBP12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 ADIPOR2Q86V24 386 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 ZNF683Q8IZ20 524 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 CCDC112Q8NEF3 446 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 HSPH1Q92598 858 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 SNRNP25Q9BV90 132 aaKnown RBP12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 CATSPERBQ9H7T0 1116 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 ZWILCHQ9H900 591 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 POLMQ9NP87 494 aaPredicted RBP12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 OSGEPQ9NPF4 335 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 ZDHHC4Q9NPG8 344 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 VPS28Q9UK41 221 aa12.43□□□□□ -0.42
CSNK1E-213ENST00000495232 FAM72CH0Y354 149 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 H0Y858 1186 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 EEF2KO00418 725 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 SYNCRIPO60506 623 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 ALDH1A2O94788 518 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 PAPSS2O95340 614 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 DLDP09622 509 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 HOXB2P14652 356 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 RHOQP17081 205 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 COL9A1P20849 921 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 ARL4AP40617 200 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 WASP42768 502 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 IRAK1P51617 712 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 DGKEP52429 567 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 ZNF135P52742 658 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 NAP1L1P55209 391 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 SULT2A1Q06520 285 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 STARD3Q14849 445 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 SMTNL2Q2TAL5 461 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 PLEKHG6Q3KR16 790 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 FUT11Q495W5 492 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 PPP6R3Q5H9R7 873 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 KCNT1Q5JUK3 1230 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 FAM72AQ5TYM5 149 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 DAB2IPQ5VWQ8 1189 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 TMEM215Q68D42 235 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 FAM72DQ6L9T8 149 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 CXorf57Q6NSI4 855 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 RAD9BQ6WBX8 426 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 FAM72BQ86X60 149 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 PYROXD2Q8N2H3 581 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 CAMKK1Q8N5S9 505 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 ARFGAP1Q8N6T3 406 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 TSTD1Q8NFU3 115 aa12.42□□□□□ -0.42
CSNK1E-213ENST00000495232 CYB5D2Q8WUJ1 264 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms