RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TACR2P21452 398 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 GALCP54803 685 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 YWHAZP63104 245 aaKnown RBP24.03■■□□□ 1.44
COL27A1-208ENST00000494780 RACK1P63244 317 aaKnown RBP24.03■■□□□ 1.44
COL27A1-208ENST00000494780 ECT2LQ008S8 904 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 ZC3H12AQ5D1E8 599 aaKnown RBP24.03■■□□□ 1.44
COL27A1-208ENST00000494780 RAP1GAP2Q684P5 730 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 CHSY1Q86X52 802 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 THAP9Q9H5L6 903 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 ADAMTS1Q9UHI8 967 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 CYTH4Q9UIA0 394 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 FZD4Q9ULV1 537 aa24.03■■□□□ 1.44
COL27A1-208ENST00000494780 CABIN1Q9Y6J0 2220 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 A0A1W2PPC4 97 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 FAM47DPA6NHR8 397 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 LRRC72A6NJI9 287 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 TTC34A8MYJ7 566 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 H0Y8X5 98 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 MID1O15344 667 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 THAP12O43422 761 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 FGFR1OPO95684 399 aaKnown RBP24.02■■□□□ 1.44
COL27A1-208ENST00000494780 TRUB2O95900 331 aaKnown RBP24.02■■□□□ 1.44
COL27A1-208ENST00000494780 IGLV3-25P01717 112 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 GNA15P30679 374 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 CTSOP43234 321 aaPredicted RBP24.02■■□□□ 1.44
COL27A1-208ENST00000494780 GRK6P43250 576 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 RNF219Q5W0B1 726 aaPredicted RBP24.02■■□□□ 1.44
COL27A1-208ENST00000494780 LAYNQ6UX15 382 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 TMPRSS7Q7RTY8 843 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 MMAAQ8IVH4 418 aaKnown RBP24.02■■□□□ 1.44
COL27A1-208ENST00000494780 ATP6V0D2Q8N8Y2 350 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 FAM81BQ96LP2 452 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 OMDQ99983 421 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 ACE2Q9BYF1 805 aaPredicted RBP24.02■■□□□ 1.44
COL27A1-208ENST00000494780 NEUROG2Q9H2A3 272 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 CCDC86Q9H6F5 360 aaKnown RBP24.02■■□□□ 1.44
COL27A1-208ENST00000494780 SERGEFQ9UGK8 458 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 LHX6Q9UPM6 363 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 CEP83Q9Y592 693 aa24.02■■□□□ 1.44
COL27A1-208ENST00000494780 A0A1W2PP55 124 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 KCNK3O14649 394 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 VILLO15195 856 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 TNFSF14O43557 240 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 RNASEH2AO75792 299 aaKnown RBP24.01■■□□□ 1.43
COL27A1-208ENST00000494780 SLC8A1P32418 973 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 C21orf59P57076 290 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 EIF4EBP2Q13542 120 aaPredicted RBP24.01■■□□□ 1.43
COL27A1-208ENST00000494780 SLC12A1Q13621 1099 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 KCNT1Q5JUK3 1230 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 NCEH1Q6PIU2 408 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 LRSAM1Q6UWE0 723 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 APCDD1Q8J025 514 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 OR2T34Q8NGX1 318 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 SKA1Q96BD8 255 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 FAM129BQ96TA1 746 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.01■■□□□ 1.43
COL27A1-208ENST00000494780 SLC12A6Q9UHW9 1150 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 SLCO3A1Q9UIG8 710 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 PLXNB3Q9ULL4 1909 aa24.01■■□□□ 1.43
COL27A1-208ENST00000494780 TMEM131Q92545 1883 aa24■■□□□ 1.43
COL27A1-208ENST00000494780 KCNU1A8MYU2 1149 aa24■■□□□ 1.43
COL27A1-208ENST00000494780 F5H5T6 163 aa24■■□□□ 1.43
COL27A1-208ENST00000494780 PDCLQ13371 301 aa24■■□□□ 1.43
COL27A1-208ENST00000494780 TPX2Q9ULW0 747 aaKnown RBP24■■□□□ 1.43
COL27A1-208ENST00000494780 ANKRD11Q6UB99 2663 aaPredicted RBP24■■□□□ 1.43
COL27A1-208ENST00000494780 SPEGQ15772 3267 aa24■■□□□ 1.43
COL27A1-208ENST00000494780 CACNA1GO43497 2377 aa24■■□□□ 1.43
COL27A1-208ENST00000494780 C10orf142B7Z368 130 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 ADH1BP00325 375 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 SLC2A3P11169 496 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 NNMTP40261 264 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 CCR5P51681 352 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 SULT2A1Q06520 285 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 INAVAQ3KP66 663 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 SND1Q7KZF4 910 aaKnown RBP eCLIP23.99■■□□□ 1.43
COL27A1-208ENST00000494780 GALNT15Q8N3T1 639 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 PTPRN2Q92932 1015 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 SLC6A18Q96N87 628 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 PRMT1Q99873 361 aaKnown RBP23.99■■□□□ 1.43
COL27A1-208ENST00000494780 ACP6Q9NPH0 428 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 PTPRBP23467 1997 aa23.99■■□□□ 1.43
COL27A1-208ENST00000494780 A0A1B0GTQ1 180 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 GLI1P08151 1106 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 GOT1P17174 413 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 ABCB4P21439 1286 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 C5AR1P21730 350 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 PSMD8P48556 350 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 OXCT1P55809 520 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 PITX1P78337 314 aaPredicted RBP23.98■■□□□ 1.43
COL27A1-208ENST00000494780 CDK17Q00537 523 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 ELAVL3Q14576 367 aaKnown RBP23.98■■□□□ 1.43
COL27A1-208ENST00000494780 TTC39BQ5VTQ0 682 aaPredicted RBP23.98■■□□□ 1.43
COL27A1-208ENST00000494780 TRIM65Q6PJ69 517 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 STK40Q8N2I9 435 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 AADATQ8N5Z0 425 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 RPL10LQ96L21 214 aaKnown RBP23.98■■□□□ 1.43
COL27A1-208ENST00000494780 FAM204AQ9H8W3 233 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 EBF2Q9HAK2 575 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 ASNSD1Q9NWL6 643 aa23.98■■□□□ 1.43
COL27A1-208ENST00000494780 WDFY3Q8IZQ1 3526 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms