RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 DCTN2Q13561 401 aaKnown RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 CYLC2Q14093 348 aaPredicted RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 EEF1DP3Q658K8 133 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 SNRNP48Q6IEG0 339 aaKnown RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 OR6B2Q6IFH4 312 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 BNC2Q6ZN30 1099 aaPredicted RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 KYQ8NBH2 561 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 GRIN3AQ8TCU5 1115 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 ATP2A3Q93084 1043 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 ANKRD36BP1Q96IX9 119 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 FERMT1Q9BQL6 677 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 C11orf84Q9BUA3 381 aaPredicted RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 CCDC160A6NGH7 325 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 MATN2O00339 956 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 DGKIO75912 1065 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 CXCL8P10145 99 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 ERVK-10P10266 1014 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 PGAM1P18669 254 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 EFNA5P52803 228 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 IRF9Q00978 393 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 NSUN2Q08J23 767 aaKnown RBP eCLIP15.72■□□□□ 0.11
SDF4-207ENST00000494748 PPP2R5DQ14738 602 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 CCDC153Q494R4 210 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 TSHZ1Q6ZSZ6 1077 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 CATSPER1Q8NEC5 780 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 DDI1Q8WTU0 396 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 RCN3Q96D15 328 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 TEPSINQ96N21 525 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 FCRL3Q96P31 734 aaPredicted RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 TBCBQ99426 244 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 SYBUQ9NX95 663 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 CNOT11Q9UKZ1 510 aaKnown RBP15.72■□□□□ 0.11
SDF4-207ENST00000494748 USP3Q9Y6I4 520 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 AK5Q9Y6K8 562 aa15.72■□□□□ 0.11
SDF4-207ENST00000494748 GOLGA8QA0A0J9YX86 632 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 GOLGA8OA6NCC3 632 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 GOLGA8NF8WBI6 632 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 B4GALT5O43286 388 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 CHRNGP07510 517 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 THRAP10827 490 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 DPYSL2Q16555 572 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 LSM12Q3MHD2 195 aaKnown RBP15.71■□□□□ 0.11
SDF4-207ENST00000494748 SH3D19Q5HYK7 790 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 NCBP2-AS2Q69YL0 99 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 KLHL35Q6PF15 583 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 DHRS4L2Q6PKH6 230 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 C16orf89Q6UX73 402 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 CDR2LQ86X02 465 aaPredicted RBP15.71■□□□□ 0.11
SDF4-207ENST00000494748 TMEM151AQ8N4L1 468 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 DCLK2Q8N568 766 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 TDRD5Q8NAT2 981 aaKnown RBP15.71■□□□□ 0.11
SDF4-207ENST00000494748 ADAM32Q8TC27 787 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 NGRNQ9NPE2 291 aaKnown RBP15.71■□□□□ 0.11
SDF4-207ENST00000494748 DTLQ9NZJ0 730 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 ADAMTS5Q9UNA0 930 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 HES2Q9Y543 173 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 TMEM114B3SHH9 223 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 KRT19P08727 400 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 VDRP11473 427 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 ICAM3P32942 547 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 CCR10P46092 362 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 CSRP3P50461 194 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 ATXN1P54253 815 aaKnown RBP15.71■□□□□ 0.11
SDF4-207ENST00000494748 GALNT4Q8N4A0 578 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 MTMR14Q8NCE2 650 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 EVPLQ92817 2033 aa15.71■□□□□ 0.11
SDF4-207ENST00000494748 ARHGAP10A1A4S6 786 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 ZBTB42B2RXF5 422 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 GRID2O43424 1007 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 COQ9O75208 318 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 ZNF23P17027 643 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 MX2P20592 715 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 MPSTP25325 297 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 TXNL4AP83876 142 aaKnown RBP15.71■□□□□ 0.1
SDF4-207ENST00000494748 LAMTOR4Q0VGL1 99 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 MGAT5BQ3V5L5 792 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 HSP90AA5PQ58FG0 334 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 LCLAT1Q6UWP7 414 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 MPZL3Q6UWV2 235 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 PGAM4Q8N0Y7 254 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 RP9Q8TA86 221 aaKnown RBP15.71■□□□□ 0.1
SDF4-207ENST00000494748 MCMBPQ9BTE3 642 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 ACSS2Q9NR19 701 aa15.71■□□□□ 0.1
SDF4-207ENST00000494748 FNDC1Q4ZHG4 1894 aaPredicted RBP15.7■□□□□ 0.1
SDF4-207ENST00000494748 SBK3P0C264 359 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 TYK2P29597 1187 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 MAGEA8P43361 318 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 SERPINB8P50452 374 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 PLOD1Q02809 727 aaPredicted RBP15.7■□□□□ 0.1
SDF4-207ENST00000494748 PKDCCQ504Y2 493 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 CES3Q6UWW8 571 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 CARM1Q86X55 608 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 RNF148Q8N7C7 305 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 AGR3Q8TD06 166 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 USP13Q92995 863 aaPredicted RBP15.7■□□□□ 0.1
SDF4-207ENST00000494748 AKT1S1Q96B36 256 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 LIN28AQ9H9Z2 209 aaKnown RBP15.7■□□□□ 0.1
SDF4-207ENST00000494748 SCN1AP35498 2009 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 H0YIN7 160 aa15.7■□□□□ 0.1
SDF4-207ENST00000494748 JUNP05412 331 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms