RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ZNF18P17022 549 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 KCNA4P22459 653 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 MZF1P28698 734 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-216ENST00000494613 SCNN1AP37088 669 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 PLK1P53350 603 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 JAM2P57087 298 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 UBXN1Q04323 297 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 MTA1Q13330 715 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 ARID5BQ14865 1188 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 SYCP1Q15431 976 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 HNRNPA1L2Q32P51 320 aaKnown RBP16.1■□□□□ 0.17
LIMS2-216ENST00000494613 PLEKHG6Q3KR16 790 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 SLC25A52Q3SY17 297 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 WDR45BQ5MNZ6 344 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 RABGAP1LQ5R372 815 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 C9orf64Q5T6V5 341 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 FAM102AQ5T9C2 384 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-216ENST00000494613 N4BP2L1Q5TBK1 243 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-216ENST00000494613 OTUD1Q5VV17 481 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-216ENST00000494613 NAA35Q5VZE5 725 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 CIR1Q86X95 450 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-216ENST00000494613 ZNF677Q86XU0 584 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 CACUL1Q86Y37 369 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 KDM1BQ8NB78 822 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 ANKRD20A12PQ8NF67 263 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 SLC20A1Q8WUM9 679 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 PGAP3Q96FM1 320 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-216ENST00000494613 PCMTD1Q96MG8 357 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-216ENST00000494613 RPRD1AQ96P16 312 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-216ENST00000494613 TKTL2Q9H0I9 626 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 HSD3B7Q9H2F3 369 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 FBRSQ9HAH7 460 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 ANLNQ9NQW6 1124 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 ARHGEF38Q9NXL2 777 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 TMEM63CQ9P1W3 806 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 TMEM59LQ9UK28 342 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 VANGL2Q9ULK5 521 aa16.1■□□□□ 0.17
LIMS2-216ENST00000494613 CEP192Q8TEP8 1941 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.09■□□□□ 0.17
LIMS2-216ENST00000494613 TARSL2A2RTX5 802 aaKnown RBP16.09■□□□□ 0.17
LIMS2-216ENST00000494613 GOLGA8SH3BPF8 625 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 SIN3BO75182 1162 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 CYP1A1P04798 512 aaPredicted RBP16.09■□□□□ 0.17
LIMS2-216ENST00000494613 PDGFRAP16234 1089 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 ACSL1P33121 698 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 STAT1P42224 750 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 MAPK8P45983 427 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 NUMBP49757 651 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 SULT1E1P49888 294 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 NOMO3P69849 1222 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 CDR2Q01850 454 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 ZBTB16Q05516 673 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 DEUP1Q05D60 604 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 TYRO3Q06418 890 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 ZNF177Q13360 481 aaPredicted RBP16.09■□□□□ 0.17
LIMS2-216ENST00000494613 C5orf22Q49AR2 442 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 BRMS1LQ5PSV4 323 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 DCAF12L1Q5VU92 463 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 SND1Q7KZF4 910 aaKnown RBP eCLIP16.09■□□□□ 0.17
LIMS2-216ENST00000494613 APTXQ7Z2E3 356 aaKnown RBP16.09■□□□□ 0.17
LIMS2-216ENST00000494613 RABEPKQ7Z6M1 372 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 DHX40Q8IX18 779 aaKnown RBP16.09■□□□□ 0.17
LIMS2-216ENST00000494613 ALG14Q96F25 216 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 SPAG5Q96R06 1193 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 FAM129BQ96TA1 746 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 TBCBQ99426 244 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 RSPH9Q9H1X1 276 aaPredicted RBP16.09■□□□□ 0.17
LIMS2-216ENST00000494613 STAP1Q9ULZ2 295 aa16.09■□□□□ 0.17
LIMS2-216ENST00000494613 A0A1B0GVM2 712 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 TCAF2A6NFQ2 919 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 LGALS16A8MUM7 142 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 I6L893 689 aaPredicted RBP16.08■□□□□ 0.16
LIMS2-216ENST00000494613 ARHGAP33O14559 1287 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 DNTTP04053 509 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 GNSP15586 552 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 FLT3P36888 993 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 PI4KAP42356 2102 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 IRAK1P51617 712 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 OXCT1P55809 520 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 FMO1Q01740 532 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 CENPCQ03188 943 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 TTC39BQ5VTQ0 682 aaPredicted RBP16.08■□□□□ 0.16
LIMS2-216ENST00000494613 CXorf57Q6NSI4 855 aaKnown RBP16.08■□□□□ 0.16
LIMS2-216ENST00000494613 TRNP1Q6NT89 227 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 PHLDB2Q86SQ0 1253 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 MSANTD4Q8NCY6 345 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 NEK11Q8NG66 645 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 OR52K2Q8NGK3 314 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 SLC30A5Q8TAD4 765 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 PTPRN2Q92932 1015 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 C1orf74Q96LT6 269 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 ERGIC2Q96RQ1 377 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 PPP1R9BQ96SB3 815 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 PCDHB18PQ96TA0 734 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 FEM1AQ9BSK4 669 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 GTPBP2Q9BX10 602 aaKnown RBP16.08■□□□□ 0.16
LIMS2-216ENST00000494613 TMEM51Q9NW97 253 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 DAAM1Q9Y4D1 1078 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 SNX10Q9Y5X0 201 aa16.08■□□□□ 0.16
LIMS2-216ENST00000494613 SPTBN2O15020 2390 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms