RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 DHRS13Q6UX07 377 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 DBX2Q6ZNG2 339 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 METTL3Q86U44 580 aaKnown RBP12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 DENND1CQ8IV53 801 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 ARHGEF19Q8IW93 802 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 CADM4Q8NFZ8 388 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 PIP4K2CQ8TBX8 421 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 ADAM32Q8TC27 787 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 PRCCQ92733 491 aaPredicted RBP12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 CYFIP2Q96F07 1278 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 ZDHHC5Q9C0B5 715 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 ELOVL2Q9NXB9 296 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 KIAA1522Q9P206 1035 aaPredicted RBP12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 DNMT3LQ9UJW3 386 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 ZNF462Q96JM2 2506 aa12.23□□□□□ -0.45
CSNK1E-212ENST00000494610 TP53BP1Q12888 1972 aaPredicted RBP12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 H0Y8X5 98 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 SYNCRIPO60506 623 aaKnown RBP12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 CER1O95813 267 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 KIF11P52732 1056 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 MAPK8IP2Q13387 824 aaPredicted RBP12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 ZNF394Q53GI3 561 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 ZNF677Q86XU0 584 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 FAM71AQ8IYT1 594 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 CCDC42Q96M95 316 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 HNRNPABQ99729 332 aaKnown RBP12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 TM9SF3Q9HD45 589 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 SLC27A6Q9Y2P4 619 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 PLXNA2O75051 1894 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 KNTC1P50748 2209 aa12.22□□□□□ -0.45
CSNK1E-212ENST00000494610 MUC22E2RYF6 1773 aaPredicted RBP12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 PLK4O00444 970 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 C1QL1O75973 258 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 ACADMP11310 421 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 KRT5P13647 590 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 USP8P40818 1118 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 SGSHP51688 502 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 PTK2Q05397 1052 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 GOLGA8FQ08AF8 430 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 GOLGA8DPQ0D2H9 430 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 PPP1R26Q5T8A7 1209 aaPredicted RBP12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 SERPINA13PQ6UXR4 307 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 GATAD2AQ86YP4 633 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 TATDN2Q93075 761 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 BIRC7Q96CA5 298 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 KREMEN1Q96MU8 473 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 ARID3AQ99856 593 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 CNTN6Q9UQ52 1028 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 ANKRD6Q9Y2G4 727 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 PCDHB4Q9Y5E5 795 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 RAI2Q9Y5P3 530 aa12.21□□□□□ -0.45
CSNK1E-212ENST00000494610 SLC12A8A0AV02 714 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 GOLGA6L9A6NEM1 432 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 TULP2O00295 520 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 WNT9AO14904 365 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 FLRT2O43155 660 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 MED7O43513 233 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 AKR1B10O60218 316 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 FSBPO95073 299 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 IGLV3-19P01714 112 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 PAEPP09466 180 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 ZNF883P0CG24 379 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 MSNP26038 577 aaKnown RBP12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 KRT83P78385 493 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 CCZ1BP86790 482 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 CCZ1P86791 482 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 APBA1Q02410 837 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 INCA1Q0VD86 236 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 DNAJC3Q13217 504 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 STILQ15468 1287 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 SPA17Q15506 151 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 PTPRNQ16849 979 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 GJB7Q6PEY0 223 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 TRIM72Q6ZMU5 477 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 ANKS1BQ7Z6G8 1248 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 UNC93AQ86WB7 457 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 DDI1Q8WTU0 396 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 ORAI3Q9BRQ5 295 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 CISHQ9NSE2 258 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 ZKSCAN5Q9Y2L8 839 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 USP3Q9Y6I4 520 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 PTPRQQ9UMZ3 2332 aa12.2□□□□□ -0.46
CSNK1E-212ENST00000494610 MAST4O15021 2626 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 EIF4E1BA6NMX2 242 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 CYSRT1A8MQ03 144 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 FOXN3O00409 490 aaPredicted RBP12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 ZSCAN12O43309 604 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 TLX3O43711 291 aaPredicted RBP12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 HLA-FP30511 346 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 OXTRP30559 389 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 NUMBP49757 651 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 AFF3P51826 1226 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 RPS14P62263 151 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 SMAD1Q15797 465 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 KLHDC10Q6PID8 442 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 TMEM270Q6UE05 265 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms