RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 F5H5T6 163 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 EPHB6O15197 1021 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 GDF9O60383 454 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 ASLP04424 464 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 EPHX1P07099 455 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 MMEP08473 750 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 TNNT1P13805 278 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 POLR2EP19388 210 aaKnown RBP13.63□□□□□ -0.23
ERCC3-209ENST00000494464 ABCB4P21439 1286 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 TACR2P21452 398 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 SOX5P35711 763 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 PTGER3P43115 390 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 RPL6Q02878 288 aaKnown RBP13.63□□□□□ -0.23
ERCC3-209ENST00000494464 LMAN2Q12907 356 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 OTUD1Q5VV17 481 aaPredicted RBP13.63□□□□□ -0.23
ERCC3-209ENST00000494464 TCEAL6Q6IPX3 200 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 KIAA1324Q6UXG2 1013 aaKnown RBP13.63□□□□□ -0.23
ERCC3-209ENST00000494464 XYLT1Q86Y38 959 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 SYT12Q8IV01 421 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 CCDC117Q8IWD4 279 aaPredicted RBP13.63□□□□□ -0.23
ERCC3-209ENST00000494464 TMEFF1Q8IYR6 380 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 LGI2Q8N0V4 545 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 CYB5D2Q8WUJ1 264 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 TCEAL3Q969E4 200 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 NT5C3BQ969T7 300 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 TTC17Q96AE7 1141 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 C18orf8Q96DM3 657 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 PGAP3Q96FM1 320 aaPredicted RBP13.63□□□□□ -0.23
ERCC3-209ENST00000494464 NPY6RQ99463 290 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 SLC6A17Q9H1V8 727 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 PRDM16Q9HAZ2 1276 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 RXFP3Q9NSD7 469 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 TMEM51Q9NW97 253 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 TRMT1Q9NXH9 659 aaKnown RBP13.63□□□□□ -0.23
ERCC3-209ENST00000494464 EVLQ9UI08 416 aaPredicted RBP13.63□□□□□ -0.23
ERCC3-209ENST00000494464 STAP1Q9ULZ2 295 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 CYP8B1Q9UNU6 501 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 PLA2G4CQ9UP65 541 aa13.63□□□□□ -0.23
ERCC3-209ENST00000494464 A0A1B0GVM2 712 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 LNP1A1A4G5 178 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 TCAF2A6NFQ2 919 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 M0QYT0 321 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 GFPT2O94808 682 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 IGLV3-19P01714 112 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 CCDC175P0C221 793 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 HNRNPH3P31942 346 aaKnown RBP13.62□□□□□ -0.23
ERCC3-209ENST00000494464 CDR2Q01850 454 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 FNDC3BQ53EP0 1204 aaKnown RBP13.62□□□□□ -0.23
ERCC3-209ENST00000494464 RABGAP1LQ5R372 815 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 RAD9BQ6WBX8 426 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 TRIM72Q6ZMU5 477 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 ARCQ7LC44 396 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 ERICH1Q86X53 443 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 TMPRSS6Q8IU80 811 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 REXO1L1PQ8IX06 675 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 CFAP52Q8N1V2 620 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 CARNMT1Q8N4J0 409 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 KDM1BQ8NB78 822 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 OR2T3Q8NH03 318 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 ERLEC1Q96DZ1 483 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 SIPA1Q96FS4 1042 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 SPAG5Q96R06 1193 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 EDEM2Q9BV94 578 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 NLRC4Q9NPP4 1024 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 CD93Q9NPY3 652 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.62□□□□□ -0.23
ERCC3-209ENST00000494464 INTS6Q9UL03 887 aaKnown RBP13.62□□□□□ -0.23
ERCC3-209ENST00000494464 PAXBP1Q9Y5B6 917 aa13.62□□□□□ -0.23
ERCC3-209ENST00000494464 SYNJ2BP-COX16A0A087WUM0 186 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 SOWAHDA6NJG2 315 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 KHNYNO15037 678 aaKnown RBP13.61□□□□□ -0.23
ERCC3-209ENST00000494464 CYP1A1P04798 512 aaPredicted RBP13.61□□□□□ -0.23
ERCC3-209ENST00000494464 HLA-EP13747 358 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 CD6P30203 668 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 CSKP41240 450 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 STAT1P42224 750 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 SULT1E1P49888 294 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 FMO1Q01740 532 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 NME3Q13232 169 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 SLC12A1Q13621 1099 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 TSR1Q2NL82 804 aaKnown RBP13.61□□□□□ -0.23
ERCC3-209ENST00000494464 FSCBQ5H9T9 825 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 PITRM1Q5JRX3 1037 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 BRMS1LQ5PSV4 323 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 FAM102AQ5T9C2 384 aaPredicted RBP13.61□□□□□ -0.23
ERCC3-209ENST00000494464 NAA35Q5VZE5 725 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 ARMCX6Q7L4S7 300 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 NEK11Q8NG66 645 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 SLC20A1Q8WUM9 679 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 PIGKQ92643 395 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 PRCCQ92733 491 aaPredicted RBP13.61□□□□□ -0.23
ERCC3-209ENST00000494464 RNF34Q969K3 372 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 MYO19Q96H55 970 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 PCMTD1Q96MG8 357 aaPredicted RBP13.61□□□□□ -0.23
ERCC3-209ENST00000494464 ADAM33Q9BZ11 813 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 ITM2CQ9NQX7 267 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 COX16Q9P0S2 106 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 KIAA1522Q9P206 1035 aaPredicted RBP13.61□□□□□ -0.23
ERCC3-209ENST00000494464 PILRBQ9UKJ0 227 aa13.61□□□□□ -0.23
ERCC3-209ENST00000494464 PCDH15Q96QU1 1955 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms