RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CD68P34810 354 aaPredicted RBP6.98□□□□□ -1.29
MSH5-217ENST00000494458 ATP5C1P36542 298 aaKnown RBP6.98□□□□□ -1.29
MSH5-217ENST00000494458 FDFT1P37268 417 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 NDST2P52849 883 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 EPHA5P54756 1037 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 NRLP54845 237 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 ARPP19P56211 112 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 GPX6P59796 221 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 COG7P83436 770 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 SKOR1P84550 965 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 GAD2Q05329 585 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 AUHQ13825 339 aaKnown RBP6.98□□□□□ -1.29
MSH5-217ENST00000494458 KYNUQ16719 465 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 MSS51Q4VC12 460 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 TEX44Q53QW1 395 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 FNBP1LQ5T0N5 605 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 HECTD3Q5T447 861 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 C6orf118Q5T5N4 469 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 UBAP2Q5T6F2 1119 aaKnown RBP6.98□□□□□ -1.29
MSH5-217ENST00000494458 ARMC3Q5W041 872 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 NUGGCQ68CJ6 796 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 NADSYN1Q6IA69 706 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 TADA2BQ86TJ2 420 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 TMC8Q8IU68 726 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 FAM217AQ8IXS0 508 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 AGGF1Q8N302 714 aaeCLIP6.98□□□□□ -1.29
MSH5-217ENST00000494458 TEX26Q8N6G2 289 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 ATP6V0D2Q8N8Y2 350 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 GPR152Q8TDT2 470 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 GIPC2Q8TF65 315 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 EXOC4Q96A65 974 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 TADA1Q96BN2 335 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 PLD4Q96BZ4 506 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 TBC1D31Q96DN5 1066 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 SIGLEC10Q96LC7 697 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 TEKT5Q96M29 485 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 PWWP2AQ96N64 755 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 TTC25Q96NG3 672 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 SERPINB12Q96P63 405 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 IL12RB2Q99665 862 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 SEPT5Q99719 369 aaPredicted RBP6.98□□□□□ -1.29
MSH5-217ENST00000494458 DHRS4Q9BTZ2 278 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 CATSPERBQ9H7T0 1116 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 CCSER2Q9H7U1 834 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 PPCSQ9HAB8 311 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 PLAC1Q9HBJ0 212 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 LRRC4CQ9HCJ2 640 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 PSD3Q9NYI0 1048 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 DONSONQ9NYP3 566 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 UXTQ9UBK9 157 aaPredicted RBP6.98□□□□□ -1.29
MSH5-217ENST00000494458 LGALS13Q9UHV8 139 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 XPO7Q9UIA9 1087 aaKnown RBP6.98□□□□□ -1.29
MSH5-217ENST00000494458 DNMT3LQ9UJW3 386 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 INSL5Q9Y5Q6 135 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 SNX10Q9Y5X0 201 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 CLUHO75153 1309 aa6.98□□□□□ -1.29
MSH5-217ENST00000494458 KIAA1671Q9BY89 1806 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 SYNJ2BP-COX16A0A087WUM0 186 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 LINC01553A4QN01 128 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 C2orf71A6NGG8 1288 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ERI2A8K979 691 aaKnown RBP6.97□□□□□ -1.29
MSH5-217ENST00000494458 H3BNC9 293 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 TK2O00142 265 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 MATN3O15232 486 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 COCHO43405 550 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 SLC34A2O95436 690 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 KLKB1P03952 638 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 SHBGP04278 402 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 GSTA2P09210 222 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ATP2A2P16615 1042 aaKnown RBP6.97□□□□□ -1.29
MSH5-217ENST00000494458 GCAP28676 217 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 HOXA9P31269 272 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 MMP13P45452 471 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ALDH1A3P47895 512 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 VPS41P49754 854 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ARL4CP56559 192 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ERVFC1P60507 584 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 SLC7A9P82251 487 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 EFEMP1Q12805 493 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 PLD1Q13393 1074 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 FRG1Q14331 258 aaKnown RBP6.97□□□□□ -1.29
MSH5-217ENST00000494458 STAT4Q14765 748 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 HIF1AQ16665 826 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 PABPC1LQ4VXU2 614 aaKnown RBP6.97□□□□□ -1.29
MSH5-217ENST00000494458 HSP90B2PQ58FF3 399 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 FAM133BQ5BKY9 247 aaKnown RBP6.97□□□□□ -1.29
MSH5-217ENST00000494458 C10orf120Q5SQS8 335 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 DENND2CQ68D51 928 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 HEATR6Q6AI08 1181 aaKnown RBP6.97□□□□□ -1.29
MSH5-217ENST00000494458 FBXL22Q6P050 247 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 FAM117BQ6P1L5 589 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ZNF449Q6P9G9 518 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 PPP1R21Q6ZMI0 780 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 CENPUQ71F23 418 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ITIH5Q86UX2 942 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 PDIK1LQ8N165 341 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ZNF567Q8N184 647 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 CNTD1Q8N815 330 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 STKLD1Q8NE28 680 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 OR2W6PQ8NHA6 318 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms