RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TMEM139Q8IV31 216 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 PSTKQ8IV42 348 aaKnown RBP12.84□□□□□ -0.35
TRA2A-209ENST00000494255 PYROXD2Q8N2H3 581 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 TXLNBQ8N3L3 684 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 CCDC33Q8N5R6 958 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 ALLCQ8N6M5 410 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 CCDC112Q8NEF3 446 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 SNRNP25Q9BV90 132 aaKnown RBP12.84□□□□□ -0.35
TRA2A-209ENST00000494255 KCNH6Q9H252 994 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 DHX35Q9H5Z1 703 aaKnown RBP12.84□□□□□ -0.35
TRA2A-209ENST00000494255 RETREG1Q9H6L5 497 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 OSGEPQ9NPF4 335 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 GPATCH2LQ9NWQ4 482 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 SLC8A2Q9UPR5 921 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 MUC3AQ02505 3323 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 FAM72CH0Y354 149 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 NPC1O15118 1278 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 CREB3O43889 395 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 MTA2O94776 668 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 CNTN5O94779 1100 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 LRIG2O94898 1065 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 PROSCO94903 275 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 RHOCP08134 193 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 HNRNPLP14866 589 aaKnown RBP eCLIP12.83□□□□□ -0.35
TRA2A-209ENST00000494255 OR1E1P30953 314 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 HTR7P34969 479 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 ARHGAP25P42331 645 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 NOP2P46087 812 aaKnown RBP12.83□□□□□ -0.35
TRA2A-209ENST00000494255 KRT83P78385 493 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 MESDQ14696 234 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 ANGPT1Q15389 498 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 FUT11Q495W5 492 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 BOLA3Q53S33 107 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 FSCBQ5H9T9 825 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 C6orf118Q5T5N4 469 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 FAM72AQ5TYM5 149 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 MANEALQ5VSG8 457 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 EGFLAMQ63HQ2 1017 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 FAM72DQ6L9T8 149 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 TFAP2DQ7Z6R9 452 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 KIAA1328Q86T90 577 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 SETD3Q86TU7 594 aaPredicted RBP12.83□□□□□ -0.35
TRA2A-209ENST00000494255 FAM72BQ86X60 149 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 IL17RCQ8NAC3 791 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 TXNDC5Q8NBS9 432 aaKnown RBP12.83□□□□□ -0.35
TRA2A-209ENST00000494255 LMLNQ96KR4 655 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 PEBP4Q96S96 227 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 MAGEB5Q9BZ81 275 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 ZWILCHQ9H900 591 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 MMP17Q9ULZ9 603 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 PLA2G4CQ9UP65 541 aa12.83□□□□□ -0.35
TRA2A-209ENST00000494255 DOCK4Q8N1I0 1966 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 ASLP04424 464 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 RHOQP17081 205 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 EPHB2P29323 1055 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 NTSR1P30989 418 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 MAN1A1P33908 653 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 CSKP41240 450 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 TPI1P60174 286 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 SATB1Q01826 763 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 CSTF1Q05048 431 aaKnown RBP12.83□□□□□ -0.36
TRA2A-209ENST00000494255 TCEAL1Q15170 157 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 PITRM1Q5JRX3 1037 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 DAB2IPQ5VWQ8 1189 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 RNF219Q5W0B1 726 aaPredicted RBP12.83□□□□□ -0.36
TRA2A-209ENST00000494255 TMEM215Q68D42 235 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 CXorf57Q6NSI4 855 aaKnown RBP12.83□□□□□ -0.36
TRA2A-209ENST00000494255 SYT13Q7L8C5 426 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 ADIPOR2Q86V24 386 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 CHPFQ8IZ52 775 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 HSPH1Q92598 858 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 MUC3BQ9H195 1237 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 CATSPERBQ9H7T0 1116 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.36
TRA2A-209ENST00000494255 THAP10Q9P2Z0 257 aaPredicted RBP12.83□□□□□ -0.36
TRA2A-209ENST00000494255 FBXO4Q9UKT5 387 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 TBC1D30Q9Y2I9 924 aa12.83□□□□□ -0.36
TRA2A-209ENST00000494255 ZNF318Q5VUA4 2279 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 A0A0A6YYK5 440 aaPredicted RBP12.82□□□□□ -0.36
TRA2A-209ENST00000494255 ANTXRLA6NF34 631 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 EEF2KO00418 725 aaKnown RBP12.82□□□□□ -0.36
TRA2A-209ENST00000494255 DAPK3O43293 454 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 PAPSS2O95340 614 aaPredicted RBP12.82□□□□□ -0.36
TRA2A-209ENST00000494255 DLDP09622 509 aaKnown RBP12.82□□□□□ -0.36
TRA2A-209ENST00000494255 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
TRA2A-209ENST00000494255 IL1R2P27930 398 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 GJC1P36383 396 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 MAPKAPK2P49137 400 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 VAV2P52735 878 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 ZNF135P52742 658 aaPredicted RBP12.82□□□□□ -0.36
TRA2A-209ENST00000494255 SULT2A1Q06520 285 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 SMTNL2Q2TAL5 461 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 PLEKHG6Q3KR16 790 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 FNDC3BQ53EP0 1204 aaKnown RBP12.82□□□□□ -0.36
TRA2A-209ENST00000494255 PPP6R3Q5H9R7 873 aaPredicted RBP12.82□□□□□ -0.36
TRA2A-209ENST00000494255 ACRBPQ8NEB7 543 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 TEKT4Q8WW24 435 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 SORCS1Q8WY21 1168 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 ZDHHC4Q9NPG8 344 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 DONSONQ9NYP3 566 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms