RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 DEFB106AQ8N104 65 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 CYP4Z2PQ8N1L4 340 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 KAT5Q92993 513 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 ASB2Q96Q27 587 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 TAS2R13Q9NYV9 303 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 SIGLEC16A6NMB1 481 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 VPS4BO75351 444 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 ENDOD1O94919 500 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 GJB6O95452 261 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 CBX6O95503 412 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 CYP1A1P04798 512 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-207ENST00000494090 OR1E1P30953 314 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 AUHQ13825 339 aaKnown RBP19.53■□□□□ 0.72
COL27A1-207ENST00000494090 SLC45A4Q5BKX6 768 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 FAM171A1Q5VUB5 890 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 EDEM1Q92611 657 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 TMEM79Q9BSE2 394 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 C1QTNF7Q9BXJ2 289 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 LRRC19Q9H756 370 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 ENOPH1Q9UHY7 261 aa19.53■□□□□ 0.72
COL27A1-207ENST00000494090 COL5A2P05997 1499 aaPredicted RBP19.53■□□□□ 0.72
COL27A1-207ENST00000494090 BAIAP3O94812 1187 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 CPSF4O95639 269 aaKnown RBP19.52■□□□□ 0.72
COL27A1-207ENST00000494090 POMCP01189 267 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 KLRC2P26717 231 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 RBL1P28749 1068 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 ELF3P78545 371 aaPredicted RBP19.52■□□□□ 0.72
COL27A1-207ENST00000494090 PURAQ00577 322 aaKnown RBP19.52■□□□□ 0.72
COL27A1-207ENST00000494090 LRRC74BQ6ZQY2 392 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 CDK20Q8IZL9 346 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 STARD8Q92502 1023 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 BBS2Q9BXC9 721 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 CYP2C18P33260 490 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 RPA3P35244 121 aaPredicted RBP19.52■□□□□ 0.72
COL27A1-207ENST00000494090 TUBP50607 506 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 POLR2LP62875 67 aaKnown RBP19.52■□□□□ 0.72
COL27A1-207ENST00000494090 SLC44A2Q8IWA5 706 aaPredicted RBP19.52■□□□□ 0.72
COL27A1-207ENST00000494090 ZNF614Q8N883 585 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 LENG9Q96B70 501 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 COMMD8Q9NX08 183 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 SNX3O60493 162 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 RIC1Q4ADV7 1423 aa19.52■□□□□ 0.72
COL27A1-207ENST00000494090 ABHD2P08910 425 aa19.52■□□□□ 0.71
COL27A1-207ENST00000494090 ADORA2AP29274 412 aa19.52■□□□□ 0.71
COL27A1-207ENST00000494090 DEFB128Q7Z7B8 93 aa19.52■□□□□ 0.71
COL27A1-207ENST00000494090 MCOLN3Q8TDD5 553 aa19.52■□□□□ 0.71
COL27A1-207ENST00000494090 ART4Q93070 314 aa19.52■□□□□ 0.71
COL27A1-207ENST00000494090 ETNK2Q9NVF9 386 aa19.52■□□□□ 0.71
COL27A1-207ENST00000494090 USP20Q9Y2K6 914 aa19.52■□□□□ 0.71
COL27A1-207ENST00000494090 MEIS2O14770 477 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 SHBGP04278 402 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 TSHRP16473 764 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 RFX3P48380 749 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 RPS7P62081 194 aaKnown RBP19.51■□□□□ 0.71
COL27A1-207ENST00000494090 PCBP1Q15365 356 aaKnown RBP eCLIP19.51■□□□□ 0.713e-6■■□□□ 13.5
COL27A1-207ENST00000494090 PABPC1LQ4VXU2 614 aaKnown RBP19.51■□□□□ 0.71
COL27A1-207ENST00000494090 DHFR2Q86XF0 187 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 PHF21BQ96EK2 531 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 DPY30Q9C005 99 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 HPS4Q9NQG7 708 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 SAC3D1A6NKF1 404 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 ERI2A8K979 691 aaKnown RBP19.51■□□□□ 0.71
COL27A1-207ENST00000494090 E5RJQ4 531 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 RHBDL3P58872 404 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 TBL1YQ9BQ87 522 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 LIASO43766 372 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 PDE5AO76074 875 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 FASTKQ14296 549 aaKnown RBP19.51■□□□□ 0.71
COL27A1-207ENST00000494090 PARP6Q2NL67 630 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 ZFPM1Q8IX07 1006 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 MEI4A8MW99 385 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 ZSCAN5DPP0CG00 497 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 TCHHL1Q5QJ38 904 aaPredicted RBP19.51■□□□□ 0.71
COL27A1-207ENST00000494090 FBXO39Q8N4B4 442 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 SLC2A14Q8TDB8 520 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 DPF3Q92784 378 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 MRIQ9BWK5 157 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 RAD18Q9NS91 495 aa19.51■□□□□ 0.71
COL27A1-207ENST00000494090 TK2O00142 265 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 CNOT3O75175 753 aaKnown RBP19.5■□□□□ 0.71
COL27A1-207ENST00000494090 ADRB2P07550 413 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 NUDT17P0C025 328 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 ME2P23368 584 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 RIPOR1Q6ZS17 1223 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 TMEM39AQ9NV64 488 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 ARMCX1Q9P291 453 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 NCKAP1Q9Y2A7 1128 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 ACVR2BQ13705 512 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 ATAD3BQ5T9A4 648 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 UNC93AQ86WB7 457 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 OR56A4Q8NGH8 313 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 SPATA20Q8TB22 786 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 NMD3Q96D46 503 aaKnown RBP19.5■□□□□ 0.71
COL27A1-207ENST00000494090 ACOX2Q99424 681 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 HMX1Q9NP08 348 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-207ENST00000494090 NDUFAF1Q9Y375 327 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 CASZ1Q86V15 1759 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 MSCO60682 206 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 AKAP5P24588 427 aa19.5■□□□□ 0.71
COL27A1-207ENST00000494090 ACAT1P24752 427 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms