RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SH3PXD2AQ5TCZ1 1133 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 NAA35Q5VZE5 725 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 SLC23A3Q6PIS1 610 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 SLC36A4Q6YBV0 504 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 BNIPLQ7Z465 357 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 FAM124AQ86V42 546 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 ERICH1Q86X53 443 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 DHX40Q8IX18 779 aaKnown RBP13.03□□□□□ -0.32
HSPG2-212ENST00000493940 CCAR2Q8N163 923 aaKnown RBP13.03□□□□□ -0.32
HSPG2-212ENST00000493940 AOPEPQ8N6M6 819 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 ATP6V0D2Q8N8Y2 350 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 TMEM35BQ8NCS4 154 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 SLC30A5Q8TAD4 765 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 C18orf8Q96DM3 657 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 FAM129BQ96TA1 746 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 GPR174Q9BXC1 333 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-212ENST00000493940 CAPN10Q9HC96 672 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 SERGEFQ9UGK8 458 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 ERVW-1Q9UQF0 538 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 ASPMQ8IZT6 3477 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 LGALS16A8MUM7 142 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 GOLGA8SH3BPF8 625 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 SYNCRIPO60506 623 aaKnown RBP13.02□□□□□ -0.33
HSPG2-212ENST00000493940 SIN3BO75182 1162 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 IGLV3-19P01714 112 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 APOEP02649 317 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 PDGFRAP16234 1089 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 ENGP17813 658 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 CD6P30203 668 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 CCR1P32246 355 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 SOX5P35711 763 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 CXCR3P49682 368 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 METAP1P53582 386 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 PLEKHG6Q3KR16 790 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 C5orf22Q49AR2 442 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 C9orf64Q5T6V5 341 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 N4BP2L1Q5TBK1 243 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-212ENST00000493940 SMYD5Q6GMV2 418 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 EMC1Q8N766 993 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 OR2T3Q8NH03 318 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 C1orf216Q8TAB5 229 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 JOSD2Q8TAC2 188 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 PRCCQ92733 491 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-212ENST00000493940 PTPRN2Q92932 1015 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 CFAP57Q96MR6 1250 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 FUCA2Q9BTY2 467 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 C6orf106Q9H6K1 298 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-212ENST00000493940 ARHGEF38Q9NXL2 777 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.02□□□□□ -0.33
HSPG2-212ENST00000493940 EVLQ9UI08 416 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-212ENST00000493940 PLA2G4CQ9UP65 541 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 OR51B4Q9Y5P0 310 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 USP24Q9UPU5 2620 aa13.02□□□□□ -0.33
HSPG2-212ENST00000493940 F5H5T6 163 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 H0Y626 953 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 RNF103O00237 685 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 UNGP13051 313 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-212ENST00000493940 PMLP29590 882 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 MAPK8P45983 427 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 SULT1E1P49888 294 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 SHC2P98077 582 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 BNC1Q01954 994 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 ARID5AQ03989 594 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 CDH18Q13634 790 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 ANO6Q4KMQ2 910 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 ALFQ53S48 1182 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 FAM102AQ5T9C2 384 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-212ENST00000493940 IL31Q6EBC2 164 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 DNASE2BQ8WZ79 361 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 RNF34Q969K3 372 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 PGAP3Q96FM1 320 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-212ENST00000493940 NOX5Q96PH1 765 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 DDX50Q9BQ39 737 aaKnown RBP13.01□□□□□ -0.33
HSPG2-212ENST00000493940 TRIM62Q9BVG3 475 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 TKTL2Q9H0I9 626 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 SIK2Q9H0K1 926 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 PDCL3Q9H2J4 239 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 SYNCQ9H7C4 482 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 KIAA1522Q9P206 1035 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-212ENST00000493940 ANGPTL2Q9UKU9 493 aa13.01□□□□□ -0.33
HSPG2-212ENST00000493940 ARID1BQ8NFD5 2236 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-212ENST00000493940 PTPRBP23467 1997 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 PLXNB3Q9ULL4 1909 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 METTL12A8MUP2 240 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 NDUFS2O75306 463 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 KCNK5O95279 499 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 CFIP05156 583 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 ATP5BP06576 529 aaKnown RBP13□□□□□ -0.33
HSPG2-212ENST00000493940 ABCB4P21439 1286 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 PLK1P53350 603 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 CDR2Q01850 454 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 UBXN1Q04323 297 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 DUOXA1Q1HG43 343 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 C15orf59Q2T9L4 293 aaPredicted RBP13□□□□□ -0.33
HSPG2-212ENST00000493940 UAP1L1Q3KQV9 507 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 DCAF12L1Q5VU92 463 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 DNAAF5Q86Y56 855 aa13□□□□□ -0.33
HSPG2-212ENST00000493940 FRS2Q8WU20 508 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms