RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 WBP2Q969T9 261 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 OTUB2Q96DC9 234 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 HES6Q96HZ4 224 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 BTN2A3PQ96KV6 586 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 PSMB7Q99436 277 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 ANLNQ9NQW6 1124 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 PCDHA3Q9Y5H8 950 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 SNX10Q9Y5X0 201 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 LRRD1A4D1F6 860 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 CHURC1-FNTBB4DL54 471 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 KCNK3O14649 394 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 DDX3YO15523 660 aaKnown RBP13.85□□□□□ -0.19
MSH6-208ENST00000493177 ACSL4O60488 711 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 TUBB4AP04350 444 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 ADH5P11766 374 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 GGCXP38435 758 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 FNTBP49356 437 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 CDH6P55285 790 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 SEC13P55735 322 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 GAD2Q05329 585 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 MTA1Q13330 715 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 CA9Q16790 459 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 PPP6R3Q5H9R7 873 aaPredicted RBP13.85□□□□□ -0.19
MSH6-208ENST00000493177 RAP1GAP2Q684P5 730 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 NAIF1Q69YI7 327 aaPredicted RBP13.85□□□□□ -0.19
MSH6-208ENST00000493177 CYP4V2Q6ZWL3 525 aaPredicted RBP13.85□□□□□ -0.19
MSH6-208ENST00000493177 CHSY1Q86X52 802 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 PYROXD2Q8N2H3 581 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 RPLP0P6Q8NHW5 317 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 UBE2Q2Q8WVN8 375 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 ACDQ96AP0 544 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 RNF25Q96BH1 459 aaPredicted RBP13.85□□□□□ -0.19
MSH6-208ENST00000493177 HAPLN3Q96S86 360 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 KCTD15Q96SI1 283 aaPredicted RBP13.85□□□□□ -0.19
MSH6-208ENST00000493177 XPO7Q9UIA9 1087 aaKnown RBP13.85□□□□□ -0.19
MSH6-208ENST00000493177 GMEB2Q9UKD1 530 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 ZNF510Q9Y2H8 683 aa13.85□□□□□ -0.19
MSH6-208ENST00000493177 GOLGA6L7A0A1B0GV03 622 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.84□□□□□ -0.19
MSH6-208ENST00000493177 CREB3O43889 395 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 ZNF500O60304 480 aaPredicted RBP13.84□□□□□ -0.19
MSH6-208ENST00000493177 APODP05090 189 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 CETN2P41208 172 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 KDSRQ06136 332 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 SCAPQ12770 1279 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 ZNF211Q13398 564 aaPredicted RBP13.84□□□□□ -0.19
MSH6-208ENST00000493177 DNTTIP2Q5QJE6 756 aaKnown RBP13.84□□□□□ -0.19
MSH6-208ENST00000493177 LY6G5CQ5SRR4 150 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 MAMSTRQ6ZN01 415 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 NUDT18Q6ZVK8 323 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 CEP68Q76N32 757 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 LONP2Q86WA8 852 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 PSTKQ8IV42 348 aaKnown RBP13.84□□□□□ -0.19
MSH6-208ENST00000493177 MAP7D3Q8IWC1 876 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 BBS7Q8IWZ6 715 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 KATNAL2Q8IYT4 538 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 ADGRG2Q8IZP9 1017 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 ZBTB44Q8NCP5 570 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 RAPGEF5Q92565 580 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 RBM41Q96IZ5 413 aaKnown RBP13.84□□□□□ -0.19
MSH6-208ENST00000493177 PNKPQ96T60 521 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 EPAS1Q99814 870 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 DDX50Q9BQ39 737 aaKnown RBP13.84□□□□□ -0.19
MSH6-208ENST00000493177 TLR10Q9BXR5 811 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 CALN1Q9BXU9 219 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 MAGEB5Q9BZ81 275 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 AGO1Q9UL18 857 aaKnown RBP13.84□□□□□ -0.19
MSH6-208ENST00000493177 SMG5Q9UPR3 1016 aaKnown RBP13.84□□□□□ -0.19
MSH6-208ENST00000493177 HS3ST4Q9Y661 456 aa13.84□□□□□ -0.19
MSH6-208ENST00000493177 WDFY4Q6ZS81 3184 aa13.83□□□□□ -0.19
MSH6-208ENST00000493177 F5H5T6 163 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 H3BRJ5 948 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 I6L893 689 aaPredicted RBP13.83□□□□□ -0.2
MSH6-208ENST00000493177 EEF2KO00418 725 aaKnown RBP13.83□□□□□ -0.2
MSH6-208ENST00000493177 DAPK3O43293 454 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 SRGAP2O75044 1071 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 ZRANB2O95218 330 aaKnown RBP eCLIP13.83□□□□□ -0.2
MSH6-208ENST00000493177 LATS1O95835 1130 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 KLKB1P03952 638 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 TACR2P21452 398 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 KDELR1P24390 212 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 CXCR5P32302 372 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 ARL4AP40617 200 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 PEX5P50542 639 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 SIM2Q14190 667 aaPredicted RBP13.83□□□□□ -0.2
MSH6-208ENST00000493177 PDK2Q15119 407 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 DPYSL2Q16555 572 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 LPAL2Q16609 132 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 PREPLQ4J6C6 727 aaPredicted RBP13.83□□□□□ -0.2
MSH6-208ENST00000493177 C2orf27AQ580R0 203 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 MS4A13Q5J8X5 152 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 SEL1L2Q5TEA6 688 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 PIK3R6Q5UE93 754 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 NADSYN1Q6IA69 706 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 PKN3Q6P5Z2 889 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 LRRC31Q6UY01 552 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 HTR3DQ70Z44 454 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 RCOR2Q8IZ40 523 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 NAT16Q8N8M0 369 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 EXD1Q8NHP7 514 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms