RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NDUFAB1O14561 156 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 GPR37O15354 613 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 EFCAB14O75071 495 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 SOAT2O75908 522 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 FAM107AO95990 144 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 CPP00450 1065 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 APOEP02649 317 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 ZDHHC11BP0C7U3 371 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 CCNCP24863 283 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 PSMB4P28070 264 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 MSH2P43246 934 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 MTA1Q13330 715 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 TRIP4Q15650 581 aaPredicted RBP14.41□□□□□ -0.1
PTPN7-216ENST00000492977 PSMD5Q16401 504 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 TEX44Q53QW1 395 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 ARTNQ5T4W7 220 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 ITPRIPL1Q6GPH6 555 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 KIAA1841Q6NSI8 718 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 NLRP14Q86W24 1093 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 LRRC49Q8IUZ0 686 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 ATP6V0D2Q8N8Y2 350 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 ZNF689Q96CS4 500 aaPredicted RBP14.41□□□□□ -0.1
PTPN7-216ENST00000492977 PAFAH2Q99487 392 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 TTLL2Q9BWV7 592 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 TMEM121BQ9BXQ6 578 aaPredicted RBP14.41□□□□□ -0.1
PTPN7-216ENST00000492977 KDM4CQ9H3R0 1056 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 C11orf49Q9H6J7 331 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 KCNK9Q9NPC2 374 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 DONSONQ9NYP3 566 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 HSFX1Q9UBD0 423 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 HS3ST4Q9Y661 456 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 NUP205Q92621 2012 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 WDR27A2RRH5 827 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 SDR42E2A6NKP2 422 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 SLC38A8A6NNN8 435 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 ERI2A8K979 691 aaKnown RBP14.4□□□□□ -0.1
PTPN7-216ENST00000492977 E9PAM4 449 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 TIMP1P01033 207 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 CREB1P16220 341 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 KRT15P19012 456 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 OR1D2P34982 312 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 TUBP50607 506 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 SEC24CP53992 1094 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 SLC18A1P54219 525 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 EFEMP1Q12805 493 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 RASIP1Q5U651 963 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 CYS1Q717R9 158 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 CCNJLQ8IV13 435 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 ZNF276Q8N554 614 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 DPF3Q92784 378 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 CFAP36Q96G28 342 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 BTN2A3PQ96KV6 586 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 CCT8L2Q96SF2 557 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 CDK5RAP1Q96SZ6 601 aaKnown RBP14.4□□□□□ -0.1
PTPN7-216ENST00000492977 VN1R3Q9BXE9 311 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 UBE2OQ9C0C9 1292 aaKnown RBP14.4□□□□□ -0.1
PTPN7-216ENST00000492977 MARCH2Q9P0N8 246 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 PPARGC1AQ9UBK2 798 aaKnown RBP14.4□□□□□ -0.1
PTPN7-216ENST00000492977 IKBKGQ9Y6K9 419 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 LTBP2Q14767 1821 aa14.4□□□□□ -0.1
PTPN7-216ENST00000492977 MOCS2O96007 188 aaPredicted RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 SOD2P04179 222 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 PRKCHP24723 683 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 KPNA1P52294 538 aaPredicted RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 PPARDQ03181 441 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 RING1Q06587 406 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 PKN2Q16513 984 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 C10orf120Q5SQS8 335 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 SPOUT1Q5T280 376 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 AFMIDQ63HM1 303 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 ARHGAP12Q8IWW6 846 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 RTL3Q8N8U3 475 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 DCAKDQ8WVC6 231 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 SLC44A1Q8WWI5 657 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 CELF6Q96J87 481 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 ZNF558Q96NG5 402 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 NAT9Q9BTE0 207 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 CEP41Q9BYV8 373 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 GBA3Q9H227 469 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 TRABDQ9H4I3 376 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 SSU72Q9NP77 194 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 NKIRAS1Q9NYS0 192 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 AFF4Q9UHB7 1163 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 TTLL3Q9Y4R7 772 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 COL4A6Q14031 1691 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 FOXO6A8MYZ6 492 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 ZBTB24O43167 697 aaPredicted RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 PRPF4O43172 522 aaKnown RBP eCLIP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 ADAM12O43184 909 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 PSMD3O43242 534 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 SUN1O94901 812 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 AP2A1O95782 977 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 IGLV3-27P01718 113 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 ATF6P18850 670 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 GRIA1P42261 906 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 HNRNPH2P55795 449 aaKnown RBP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 EFTUD2Q15029 972 aaKnown RBP eCLIP14.39□□□□□ -0.11
PTPN7-216ENST00000492977 LRRC26Q2I0M4 334 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 KBTBD12Q3ZCT8 623 aa14.39□□□□□ -0.11
PTPN7-216ENST00000492977 PIK3R6Q5UE93 754 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms