RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 CEP41Q9BYV8 373 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 GBA3Q9H227 469 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 ACSS3Q9H6R3 686 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 EURLQ9NYK6 297 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 FNIP2Q9P278 1114 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 RSPH14Q9UHP6 348 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 TRHDEQ9UKU6 1024 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 MAGED2Q9UNF1 606 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 YIPF1Q9Y548 306 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 HELZP42694 1942 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 MYLKQ15746 1914 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 MTCL1Q9Y4B5 1905 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 F5H423 210 aaPredicted RBP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 KCNK1O00180 336 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 DFFAO00273 331 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 ABLIM3O94929 683 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 SEC24AO95486 1093 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 HMBSP08397 361 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 GSTA2P09210 222 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 CSH1P0DML2 217 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 CSH2P0DML3 217 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 MLNP12872 115 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 RHOQP17081 205 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 STX2P32856 288 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 MAGEA3P43357 314 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 MMP13P45452 471 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 ALDH1A3P47895 512 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 IRAK1P51617 712 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 MLLT6P55198 1093 aaPredicted RBP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 GEMIN4P57678 1058 aaKnown RBP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 GUCY1A3Q02108 690 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 CREMQ03060 361 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 RING1Q06587 406 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 PPIGQ13427 754 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 MTM1Q13496 603 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 RAB33AQ14088 237 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 VEPH1Q14D04 833 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 RASA2Q15283 850 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 GLIPR1L2Q4G1C9 344 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 MS4A13Q5J8X5 152 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 NUGGCQ68CJ6 796 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 TTC19Q6DKK2 380 aaPredicted RBP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 TIGD7Q6NT04 549 aaPredicted RBP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 LRRC31Q6UY01 552 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 C3orf62Q6ZUJ4 267 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 PID1Q7Z2X4 250 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 C14orf80Q86SX3 495 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 MIB1Q86YT6 1006 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 ARHGAP12Q8IWW6 846 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 ZNF276Q8N554 614 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 DNAJC5GQ8N7S2 189 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 ZNF461Q8TAF7 563 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 FBF1Q8TES7 1133 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 ARHGEF2Q92974 986 aaKnown RBP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 CFAP36Q96G28 342 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 TSGA13Q96PP4 275 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 ZYG11BQ9C0D3 744 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 CCSER2Q9H7U1 834 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 CYP4F11Q9HBI6 524 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 DONSONQ9NYP3 566 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 PSMC3IPQ9P2W1 217 aaPredicted RBP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 PPARGC1AQ9UBK2 798 aaKnown RBP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 STK39Q9UEW8 545 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 RABGEF1Q9UJ41 708 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 VANGL2Q9ULK5 521 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 HBS1LQ9Y450 684 aaKnown RBP9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 CEP350Q5VT06 3117 aa9.38□□□□□ -0.91
SMARCC1-208ENST00000492896 SRRM3A6NNA2 597 aaPredicted RBP9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 AVILO75366 819 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 TBX18O95935 607 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 HSPA1AP0DMV8 641 aaKnown RBP9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 HSPA1BP0DMV9 641 aaKnown RBP9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 CCNCP24863 283 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 DNAJB2P25686 324 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 GCAP28676 217 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 ELF1P32519 619 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 LSP1P33241 339 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 DMTNQ08495 405 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 ZBTB17Q13105 803 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 PLD1Q13393 1074 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 PRPSAP1Q14558 356 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 EFTUD2Q15029 972 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 TAF12Q16514 161 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 TEX44Q53QW1 395 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 HECTD3Q5T447 861 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 ARTNQ5T4W7 220 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 SNX30Q5VWJ9 437 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 AFMIDQ63HM1 303 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 RAP1GAP2Q684P5 730 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 LRRC8BQ6P9F7 803 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 OTOP2Q7RTS6 562 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 EXOC3L1Q86VI1 746 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 CHSY1Q86X52 802 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 LRRC49Q8IUZ0 686 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 IGDCC3Q8IVU1 814 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 GPR65Q8IYL9 337 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 ZNF683Q8IZ20 524 aa9.37□□□□□ -0.91
SMARCC1-208ENST00000492896 AGGF1Q8N302 714 aaeCLIP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms