RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 HCN2Q9UL51 889 aa14.39□□□□□ -0.11
CCM2-217ENST00000492883 INTUQ9ULD6 942 aa14.39□□□□□ -0.11
CCM2-217ENST00000492883 USP18Q9UMW8 372 aa14.39□□□□□ -0.11
CCM2-217ENST00000492883 EPN1Q9Y6I3 576 aaPredicted RBP14.39□□□□□ -0.11
CCM2-217ENST00000492883 SOWAHDA6NJG2 315 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 FAM72CH0Y354 149 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 SGK1O00141 431 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 NPC1O15118 1278 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 ZBTB24O43167 697 aaPredicted RBP14.38□□□□□ -0.11
CCM2-217ENST00000492883 CREB3O43889 395 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 ADAM23O75077 832 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 LRIG2O94898 1065 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 PAPSS2O95340 614 aaPredicted RBP14.38□□□□□ -0.11
CCM2-217ENST00000492883 HNRNPLP14866 589 aaKnown RBP eCLIP14.38□□□□□ -0.11
CCM2-217ENST00000492883 OR1E1P30953 314 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 L1CAMP32004 1257 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 PCK1P35558 622 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 SSR1P43307 286 aaKnown RBP14.38□□□□□ -0.11
CCM2-217ENST00000492883 DGKEP52429 567 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 NRLP54845 237 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 NRG1Q02297 640 aaPredicted RBP14.38□□□□□ -0.11
CCM2-217ENST00000492883 SLC12A1Q13621 1099 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 CRY1Q16526 586 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 FUT11Q495W5 492 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 PITRM1Q5JRX3 1037 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 ERMARDQ5T6L9 678 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 FAM72AQ5TYM5 149 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 HEATR6Q6AI08 1181 aaKnown RBP14.38□□□□□ -0.11
CCM2-217ENST00000492883 FAM72DQ6L9T8 149 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 TFAP2DQ7Z6R9 452 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 FAM72BQ86X60 149 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 PYROXD2Q8N2H3 581 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 CAMKK1Q8N5S9 505 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 TSTD1Q8NFU3 115 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 SLC35G2Q8TBE7 412 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 CYB5D2Q8WUJ1 264 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 TBC1D31Q96DN5 1066 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 LMLNQ96KR4 655 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 HHIPQ96QV1 700 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 DHX35Q9H5Z1 703 aaKnown RBP14.38□□□□□ -0.11
CCM2-217ENST00000492883 POLMQ9NP87 494 aaPredicted RBP14.38□□□□□ -0.11
CCM2-217ENST00000492883 GPATCH2LQ9NWQ4 482 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 THAP10Q9P2Z0 257 aaPredicted RBP14.38□□□□□ -0.11
CCM2-217ENST00000492883 AP4E1Q9UPM8 1137 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 PCDHA13Q9Y5I0 950 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 STON1Q9Y6Q2 735 aa14.38□□□□□ -0.11
CCM2-217ENST00000492883 EIF3CLB5ME19 914 aaKnown RBP14.37□□□□□ -0.11
CCM2-217ENST00000492883 WASH3PC4AMC7 463 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 K7ESF4 209 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 LRCH4O75427 683 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 ALDH1A2O94788 518 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 RHOCP08134 193 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 DLDP09622 509 aaKnown RBP14.37□□□□□ -0.11
CCM2-217ENST00000492883 CHRM1P11229 460 aaPredicted RBP14.37□□□□□ -0.11
CCM2-217ENST00000492883 HOXB2P14652 356 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 MZF1P28698 734 aaPredicted RBP14.37□□□□□ -0.11
CCM2-217ENST00000492883 GSDMDP57764 484 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 ZNF234Q14588 700 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 PLEKHG6Q3KR16 790 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 ZNF528Q3MIS6 628 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 BOLA3Q53S33 107 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 C6orf118Q5T5N4 469 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 DAB2IPQ5VWQ8 1189 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 RNF219Q5W0B1 726 aaPredicted RBP14.37□□□□□ -0.11
CCM2-217ENST00000492883 CXorf57Q6NSI4 855 aaKnown RBP14.37□□□□□ -0.11
CCM2-217ENST00000492883 SERPINA13PQ6UXR4 307 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 TMEM92Q6UXU6 159 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 SETD3Q86TU7 594 aaPredicted RBP14.37□□□□□ -0.11
CCM2-217ENST00000492883 RHOT2Q8IXI1 618 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 APCDD1Q8J025 514 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 ATRIPQ8WXE1 791 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 TTC17Q96AE7 1141 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 EIF3CQ99613 913 aaKnown RBP14.37□□□□□ -0.11
CCM2-217ENST00000492883 EPAS1Q99814 870 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 FAM126AQ9BYI3 521 aaPredicted RBP14.37□□□□□ -0.11
CCM2-217ENST00000492883 MUC3BQ9H195 1237 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 ZWILCHQ9H900 591 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 OSGEPQ9NPF4 335 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 LCMT1Q9UIC8 334 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 INTS6Q9UL03 887 aaKnown RBP14.37□□□□□ -0.11
CCM2-217ENST00000492883 TBC1D30Q9Y2I9 924 aa14.37□□□□□ -0.11
CCM2-217ENST00000492883 TMEM110-MUSTN1A8MSY1 372 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 SYNCRIPO60506 623 aaKnown RBP14.36□□□□□ -0.11
CCM2-217ENST00000492883 NDUFA10O95299 355 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 LCA5LO95447 670 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 APBB3O95704 486 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 ASLP04424 464 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 RHOQP17081 205 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 FECHP22830 423 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 EPHB2P29323 1055 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 HOXC13P31276 330 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 IL12RB1P42701 662 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 NOP2P46087 812 aaKnown RBP14.36□□□□□ -0.11
CCM2-217ENST00000492883 PXNP49023 591 aaPredicted RBP14.36□□□□□ -0.11
CCM2-217ENST00000492883 NUMBP49757 651 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 PLK1P53350 603 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 ST8SIA6P61647 398 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 MESDQ14696 234 aa14.36□□□□□ -0.11
CCM2-217ENST00000492883 STARD3Q14849 445 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms