RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	KCNT1	Q5JUK3	1230 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	ZFYVE27	Q5T4F4	411 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	RNF219	Q5W0B1	726 aa	Predicted RBP	13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	SDE2	Q6IQ49	451 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	AHI1	Q8N157	1196 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	TXLNB	Q8N3L3	684 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	SPEM1	Q8N4L4	309 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	CCDC112	Q8NEF3	446 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	USP33	Q8TEY7	942 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	SORCS1	Q8WY21	1168 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	EPAS1	Q99814	870 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	DESI2	Q9BSY9	194 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	ZYG11B	Q9C0D3	744 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	ELOVL2	Q9NXB9	296 aa		13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.54	□□□□□ -0.24
AGAP3-223	ENST00000492234	IGLV3-10	A0A075B6K4	115 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	DAPK3	O43293	454 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	ATP5B	P06576	529 aa	Known RBP	13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	RHOC	P08134	193 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	TNNT1	P13805	278 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	TCF4	P15884	667 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	IL1R2	P27930	398 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	MZF1	P28698	734 aa	Predicted RBP	13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	EPHB2	P29323	1055 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	CSK	P41240	450 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	WAS	P42768	502 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	CXCL12	P48061	93 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	OXCT1	P55809	520 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	TPI1	P60174	286 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	NRG1	Q02297	640 aa	Predicted RBP	13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	CA9	Q16790	459 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	EGFLAM	Q63HQ2	1017 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	MBLAC2	Q68D91	279 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	PKN3	Q6P5Z2	889 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	TRMT11	Q7Z4G4	463 aa	Known RBP	13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	CPNE8	Q86YQ8	564 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	C1orf210	Q8IVY1	113 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	ALLC	Q8N6M5	410 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	TXNDC5	Q8NBS9	432 aa	Known RBP	13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	CYB5D2	Q8WUJ1	264 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	PPP1R9B	Q96SB3	815 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	KCTD15	Q96SI1	283 aa	Predicted RBP	13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	MUC3B	Q9H195	1237 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	PLA2G4C	Q9UP65	541 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	SLC8A2	Q9UPR5	921 aa		13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	REXO2	Q9Y3B8	237 aa	Known RBP	13.53	□□□□□ -0.24
AGAP3-223	ENST00000492234	DOCK4	Q8N1I0	1966 aa		13.52	□□□□□ -0.24
AGAP3-223	ENST00000492234	RCCD1	A6NED2	376 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	EEF2K	O00418	725 aa	Known RBP	13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	ARHGAP6	O43182	974 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	BUB1	O43683	1085 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	MTA2	O94776	668 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	RARA	P10276	462 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	RHOQ	P17081	205 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	KIR2DL1	P43626	348 aa	Predicted RBP	13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	CCR3	P51677	355 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	VAV2	P52735	878 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	CSTF1	Q05048	431 aa	Known RBP	13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	SLC12A1	Q13621	1099 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	KRT81	Q14533	505 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	DMC1	Q14565	340 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	E2F5	Q15329	346 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	FUT11	Q495W5	492 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	FNDC3B	Q53EP0	1204 aa	Known RBP	13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	PITRM1	Q5JRX3	1037 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	C6orf118	Q5T5N4	469 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	TMEM215	Q68D42	235 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	RNF43	Q68DV7	783 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	ADIPOR2	Q86V24	386 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	PSTK	Q8IV42	348 aa	Known RBP	13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	CHPF	Q8IZ52	775 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	APCDD1	Q8J025	514 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	KCNV2	Q8TDN2	545 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	ACD	Q96AP0	544 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	ERLEC1	Q96DZ1	483 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	IER2	Q9BTL4	223 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	SPON2	Q9BUD6	331 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	CATSPERB	Q9H7T0	1116 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	DNAI1	Q9UI46	699 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	VPS28	Q9UK41	221 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	STARD13	Q9Y3M8	1113 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	DUSP10	Q9Y6W6	482 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234	KIAA1549L	Q6ZVL6	1849 aa		13.52	□□□□□ -0.25
AGAP3-223	ENST00000492234		A0A0A6YYK5	440 aa	Predicted RBP	13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	CHURC1-FNTB	B4DL54	471 aa		13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	WASH3P	C4AMC7	463 aa		13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	GALR2	O43603	387 aa	Predicted RBP	13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	SPOP	O43791	374 aa		13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	NTSR1	P30989	418 aa		13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	MAN1A1	P33908	653 aa		13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	ARL4A	P40617	200 aa		13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	SATB1	Q01826	763 aa		13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	KIF5A	Q12840	1032 aa		13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	EIF4H	Q15056	248 aa	Known RBP	13.51	□□□□□ -0.25
AGAP3-223	ENST00000492234	TCEAL1	Q15170	157 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms