RNA–Protein interactions for RNA: ENST00000491824.1

HCLS1-210, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-210ENST00000491824 TCEAL1Q15170 157 aa17.04■□□□□ 0.32
HCLS1-210ENST00000491824 FBXL22Q6P050 247 aa17.04■□□□□ 0.32
HCLS1-210ENST00000491824 TMEM92Q6UXU6 159 aa17.04■□□□□ 0.32
HCLS1-210ENST00000491824 ASCL5Q7RTU5 278 aa17.04■□□□□ 0.32
HCLS1-210ENST00000491824 RASSF3Q86WH2 238 aa17.04■□□□□ 0.32
HCLS1-210ENST00000491824 FAM131BQ86XD5 332 aa17.04■□□□□ 0.32
HCLS1-210ENST00000491824 TXLNBQ8N3L3 684 aa17.04■□□□□ 0.32
HCLS1-210ENST00000491824 MDGA1Q8NFP4 955 aa17.04■□□□□ 0.32
HCLS1-210ENST00000491824 TPSD1Q9BZJ3 242 aa17.04■□□□□ 0.32
HCLS1-210ENST00000491824 MRPL47Q9HD33 250 aaKnown RBP17.04■□□□□ 0.32
HCLS1-210ENST00000491824 POLR3BQ9NW08 1133 aaPredicted RBP17.04■□□□□ 0.32
HCLS1-210ENST00000491824 CLEC4EQ9ULY5 219 aa17.04■□□□□ 0.32
HCLS1-210ENST00000491824 ZNF217O75362 1048 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 PTMAP06454 111 aaKnown RBP17.03■□□□□ 0.32
HCLS1-210ENST00000491824 EPHX1P07099 455 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 RRM1P23921 792 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 CD70P32970 193 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 KRT83P78385 493 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 LMAN2Q12907 356 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 PTP4A2Q12974 167 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 ZNF234Q14588 700 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 RNF43Q68DV7 783 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 ZNF662Q6ZS27 426 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 CCAR2Q8N163 923 aaKnown RBP17.03■□□□□ 0.32
HCLS1-210ENST00000491824 GPR161Q8N6U8 529 aaKnown RBP17.03■□□□□ 0.32
HCLS1-210ENST00000491824 FAM172AQ8WUF8 416 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 CALR3Q96L12 384 aaKnown RBP17.03■□□□□ 0.32
HCLS1-210ENST00000491824 C1orf74Q96LT6 269 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 PRMT1Q99873 361 aaKnown RBP17.03■□□□□ 0.32
HCLS1-210ENST00000491824 CNPY3Q9BT09 278 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 FBRSQ9HAH7 460 aa17.03■□□□□ 0.32
HCLS1-210ENST00000491824 ZFHX2Q9C0A1 2572 aaPredicted RBP17.02■□□□□ 0.32
HCLS1-210ENST00000491824 HRO43593 1189 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 IPO7O95373 1038 aaKnown RBP17.02■□□□□ 0.32
HCLS1-210ENST00000491824 FTLP02792 175 aaPredicted RBP17.02■□□□□ 0.32
HCLS1-210ENST00000491824 ACADMP11310 421 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 TFE3P19532 575 aaPredicted RBP17.02■□□□□ 0.32
HCLS1-210ENST00000491824 RFC1P35251 1148 aaPredicted RBP17.02■□□□□ 0.32
HCLS1-210ENST00000491824 IL12RB1P42701 662 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 ZNF143P52747 638 aaPredicted RBP17.02■□□□□ 0.32
HCLS1-210ENST00000491824 CDH4P55283 916 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 SPA17Q15506 151 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 LPAL2Q16609 132 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 C15orf59Q2T9L4 293 aaPredicted RBP17.02■□□□□ 0.32
HCLS1-210ENST00000491824 FUT11Q495W5 492 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 CCDC14Q49A88 953 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 PITRM1Q5JRX3 1037 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 EFHC2Q5JST6 749 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 C6orf118Q5T5N4 469 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 OTUD1Q5VV17 481 aaPredicted RBP17.02■□□□□ 0.32
HCLS1-210ENST00000491824 KIAA1324Q6UXG2 1013 aaKnown RBP17.02■□□□□ 0.32
HCLS1-210ENST00000491824 RAD9BQ6WBX8 426 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 ADIPOR2Q86V24 386 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 JOSD2Q8TAC2 188 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 ZNF653Q96CK0 615 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 P2RY11Q96G91 374 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 ACOX2Q99424 681 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 NCAPGQ9BPX3 1015 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 MUC3BQ9H195 1237 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 SUN2Q9UH99 717 aa17.02■□□□□ 0.32
HCLS1-210ENST00000491824 ATG2BQ96BY7 2078 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 SOWAHDA6NJG2 315 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 E9PAM4 449 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 RNASEH1O60930 286 aaKnown RBP17.01■□□□□ 0.31
HCLS1-210ENST00000491824 SRGAP2O75044 1071 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 ENDOD1O94919 500 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 RETP07949 1114 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 RHOCP08134 193 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 SRPRAP08240 638 aaKnown RBP17.01■□□□□ 0.31
HCLS1-210ENST00000491824 CSKP41240 450 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 AIF1P55008 147 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 ECT2LQ008S8 904 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 SRSF5Q13243 272 aaKnown RBP17.01■□□□□ 0.31
HCLS1-210ENST00000491824 CCDC122Q5T0U0 273 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 SCYL2Q6P3W7 929 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 SLC36A4Q6YBV0 504 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 KIAA0907Q7Z7F0 614 aaPredicted RBP17.01■□□□□ 0.31
HCLS1-210ENST00000491824 CIR1Q86X95 450 aaPredicted RBP17.01■□□□□ 0.31
HCLS1-210ENST00000491824 KDM1BQ8NB78 822 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 SUMF1Q8NBK3 374 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 CYB5D2Q8WUJ1 264 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 SORCS1Q8WY21 1168 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 LOXL4Q96JB6 756 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 PRDM16Q9HAZ2 1276 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 CALCOCO1Q9P1Z2 691 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 CNOT8Q9UFF9 292 aaKnown RBP17.01■□□□□ 0.31
HCLS1-210ENST00000491824 SLC25A13Q9UJS0 675 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 VPS28Q9UK41 221 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 RAD54BQ9Y620 910 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 FANCMQ8IYD8 2048 aa17.01■□□□□ 0.31
HCLS1-210ENST00000491824 A0A1W2PQF6 199 aa17■□□□□ 0.31
HCLS1-210ENST00000491824 TCRBV5S1A1TA0A578 114 aa17■□□□□ 0.31
HCLS1-210ENST00000491824 BTNL10A8MVZ5 291 aa17■□□□□ 0.31
HCLS1-210ENST00000491824 PJA2O43164 708 aa17■□□□□ 0.31
HCLS1-210ENST00000491824 FOXD2O60548 495 aaPredicted RBP17■□□□□ 0.31
HCLS1-210ENST00000491824 RNF8O76064 485 aa17■□□□□ 0.31
HCLS1-210ENST00000491824 GJB6O95452 261 aa17■□□□□ 0.31
HCLS1-210ENST00000491824 H2AFZP0C0S5 128 aa17■□□□□ 0.31
HCLS1-210ENST00000491824 TMEM253P0C7T8 217 aa17■□□□□ 0.31
HCLS1-210ENST00000491824 CHRM1P11229 460 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms