RNA–Protein interactions for RNA: ENST00000491274.5

SDHB-208, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-208ENST00000491274 NXPE4Q6UWF7 544 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 OLFML1Q6UWY5 402 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 MMS22LQ6ZRQ5 1243 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 SLC26A9Q7LBE3 791 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 ASCL5Q7RTU5 278 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 APTXQ7Z2E3 356 aaKnown RBP6.9□□□□□ -1.3
SDHB-208ENST00000491274 ANKS1BQ7Z6G8 1248 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 CHSY1Q86X52 802 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 SFTPA1Q8IWL2 248 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 LGI2Q8N0V4 545 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 CFAP52Q8N1V2 620 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 CARNMT1Q8N4J0 409 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 ZNF557Q8N988 423 aaPredicted RBP6.9□□□□□ -1.3
SDHB-208ENST00000491274 IL17RCQ8NAC3 791 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 ZBTB44Q8NCP5 570 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 SLC30A5Q8TAD4 765 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 CPLX3Q8WVH0 158 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 DDX1Q92499 740 aaKnown RBP6.9□□□□□ -1.3
SDHB-208ENST00000491274 EZH1Q92800 747 aaPredicted RBP6.9□□□□□ -1.3
SDHB-208ENST00000491274 AZIN2Q96A70 460 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 BTN2A3PQ96KV6 586 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 FCRL2Q96LA5 508 aaPredicted RBP6.9□□□□□ -1.3
SDHB-208ENST00000491274 NAP1L5Q96NT1 182 aaPredicted RBP6.9□□□□□ -1.3
SDHB-208ENST00000491274 SLC2A13Q96QE2 648 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 AGPAT1Q99943 283 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 NUP58Q9BVL2 599 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 SELENOOQ9BVL4 669 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 SLC2A11Q9BYW1 496 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 GRIP2Q9C0E4 1043 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 TSPY26PQ9H489 355 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 WDCPQ9H6R7 721 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 NPHS2Q9NP85 383 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 C2orf42Q9NWW7 574 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 RRN3Q9NYV6 651 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 ADAM22Q9P0K1 906 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 NOCTQ9UK39 431 aaKnown RBP6.9□□□□□ -1.3
SDHB-208ENST00000491274 MMP17Q9ULZ9 603 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 PLA2G4CQ9UP65 541 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 PAXBP1Q9Y5B6 917 aa6.9□□□□□ -1.3
SDHB-208ENST00000491274 CCDC163A0A0D9SF12 145 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 A0A1B0GTH6 734 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 A0A1W2PQC6 194 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 TCRBV21S2A2A0A5A6 115 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 ANTXRLA6NF34 631 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 LRRC53A6NM62 1247 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 TMCO5BA8MYB1 307 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 KCNU1A8MYU2 1149 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 PRRT4C9JH25 899 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 F5H5T6 163 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 SGK1O00141 431 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 DAB1O75553 588 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 RPP40O75818 363 aaKnown RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 PAPSS2O95340 614 aaPredicted RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 MOCS3O95396 460 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 IGLV3-27P01718 113 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 CYP1A1P04798 512 aaPredicted RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 CALB1P05937 261 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 ATP5BP06576 529 aaKnown RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 KRT3P12035 628 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 HOXB2P14652 356 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 PDGFRAP16234 1089 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 DESP17661 470 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 CHRNB2P17787 502 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 ATF4P18848 351 aaPredicted RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 POLR2EP19388 210 aaKnown RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 MMP8P22894 467 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 CDH5P33151 784 aaPredicted RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 KIR2DL1P43626 348 aaPredicted RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 SULT1E1P49888 294 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 RPS24P62847 133 aaKnown RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 NOMO3P69849 1222 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 PITX1P78337 314 aaPredicted RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 FMO1Q01740 532 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 KLHL30Q0D2K2 578 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 SRSF5Q13243 272 aaKnown RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 CDH18Q13634 790 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 STARD3Q14849 445 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 NFKBIBQ15653 356 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 GEN1Q17RS7 908 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 RABGAP1LQ5R372 815 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 MPP7Q5T2T1 576 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 EGFLAMQ63HQ2 1017 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 RAP1GAP2Q684P5 730 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 LRSAM1Q6UWE0 723 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 LRRC31Q6UY01 552 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 CHST9Q7L1S5 443 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 ERMP1Q7Z2K6 904 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 WDR5BQ86VZ2 330 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 XYLT1Q86Y38 959 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 MFN1Q8IWA4 741 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 HJURPQ8NCD3 748 aaPredicted RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 RNF214Q8ND24 703 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 HMGB4Q8WW32 186 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 RUBCNQ92622 972 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 ERLEC1Q96DZ1 483 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 SLC39A13Q96H72 371 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 PIWIL1Q96J94 861 aaKnown RBP6.89□□□□□ -1.31
SDHB-208ENST00000491274 C11orf70Q9BRQ4 267 aa6.89□□□□□ -1.31
SDHB-208ENST00000491274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms