RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 RSPH1Q8WYR4 309 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 INPP5DQ92835 1189 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 CERS2Q96G23 380 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 MS4A4AQ96JQ5 239 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 FAM161BQ96MY7 647 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 LGMNQ99538 433 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 SGIP1Q9BQI5 828 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 TRIM15Q9C019 465 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 ARHGEF4Q9NR80 690 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 CDYLQ9Y232 598 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 E5RI56 91 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 SYN3O14994 580 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 BANF1O75531 89 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 RBP1P09455 135 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 TCF4P15884 667 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 RECQLP46063 649 aaPredicted RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 OXCT1P55809 520 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 PLD1Q13393 1074 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 TMCO4Q5TGY1 634 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 ANKS3Q6ZW76 656 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 FRA10AC1Q70Z53 315 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 MIB1Q86YT6 1006 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 CCDC185Q8N715 623 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 LENG1Q96BZ8 264 aaPredicted RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 PCED1BQ96HM7 432 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 TXLNGYQ9BZA5 131 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 FBXW11Q9UKB1 542 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 SORCS3Q9UPU3 1222 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 MBLAC1A4D2B0 266 aaPredicted RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 TBKBP1A7MCY6 615 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 NDUFS3O75489 264 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 CRTAMO95727 393 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 ZNF865P0CJ78 1059 aaPredicted RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 SKIV2L2P42285 1042 aaKnown RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 CRHR2Q13324 411 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 SH2D4BQ5SQS7 431 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 ANKRD22Q5VYY1 191 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 C16orf89Q6UX73 402 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 PRPF39Q86UA1 669 aaKnown RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 FIS1Q9Y3D6 152 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 C2orf81A6NN90 581 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 SNUPNO95149 360 aaKnown RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 PARNO95453 639 aaKnown RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 CCNB1P14635 433 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 GDF10P55107 478 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 PRMT2P55345 433 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 GBE1Q04446 702 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 SEMA5AQ13591 1074 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 ANKRD20A4Q4UJ75 823 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 AARS2Q5JTZ9 985 aaKnown RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 RNF219Q5W0B1 726 aaPredicted RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 TXNRD3NBQ6F5E7 133 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 RHBDF2Q6PJF5 856 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 UNC5AQ6ZN44 842 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 EFL1Q7Z2Z2 1120 aaKnown RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 MTDHQ86UE4 582 aaKnown RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 PDCD6IPQ8WUM4 868 aaKnown RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 ZYG11BQ9C0D3 744 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 MARCOQ9UEW3 520 aaPredicted RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 UBA6A0AVT1 1052 aaPredicted RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 B2RBV5 119 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 MYCP01106 439 aaPredicted RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 TARSP26639 723 aaKnown RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 BRCC3P46736 316 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 CD151P48509 253 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 SMAD1Q15797 465 aaKnown RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 DEFB115Q30KQ5 88 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 TRIM68Q6AZZ1 485 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 CLEC20AQ6ZU45 233 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 ITIH5Q86UX2 942 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 OR52K1Q8NGK4 314 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 KCNK16Q96T55 309 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 CEP41Q9BYV8 373 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 STN1Q9H668 368 aaKnown RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 NOD2Q9HC29 1040 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 NT5MQ9NPB1 228 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 IGSF9Q9P2J2 1179 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 UXTQ9UBK9 157 aaPredicted RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 RUVBL2Q9Y230 463 aaKnown RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 SQORQ9Y6N5 450 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 A0A087X1B8 175 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 MFSD11O43934 449 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 EDF1O60869 148 aaKnown RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 UPP2O95045 317 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 NFKB1P19838 968 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 CCNCP24863 283 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 SLC1A6P48664 564 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 POLD2P49005 469 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 MCCD1P59942 119 aaPredicted RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 INSCQ1MX18 579 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 TEX44Q53QW1 395 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 PTCD2Q8WV60 388 aaKnown RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 CCDC97Q96F63 343 aaPredicted RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 MARCH2Q9P0N8 246 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.5□□□□□ -1.21
NPHP3-208ENST00000490993 TAGLN3Q9UI15 199 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 EDN1P05305 212 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 COL6A1P12109 1028 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 SELPP16109 830 aa7.5□□□□□ -1.21
NPHP3-208ENST00000490993 NNMTP40261 264 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms