RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 LRRC57Q8N9N7 239 aa17.23■□□□□ 0.35
SFXN5-220ENST00000490056 TERB1Q8NA31 727 aa17.23■□□□□ 0.35
SFXN5-220ENST00000490056 KIAA1524Q8TCG1 905 aa17.23■□□□□ 0.35
SFXN5-220ENST00000490056 LMLNQ96KR4 655 aa17.23■□□□□ 0.35
SFXN5-220ENST00000490056 PCDH18Q9HCL0 1135 aa17.23■□□□□ 0.35
SFXN5-220ENST00000490056 CWC15Q9P013 229 aaKnown RBP17.23■□□□□ 0.35
SFXN5-220ENST00000490056 SLC27A6Q9Y2P4 619 aa17.23■□□□□ 0.35
SFXN5-220ENST00000490056 MRPS17Q9Y2R5 130 aaKnown RBP17.23■□□□□ 0.35
SFXN5-220ENST00000490056 CAPN6Q9Y6Q1 641 aa17.23■□□□□ 0.35
SFXN5-220ENST00000490056 ATG2BQ96BY7 2078 aa17.23■□□□□ 0.35
SFXN5-220ENST00000490056 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.22■□□□□ 0.35
SFXN5-220ENST00000490056 PRRT4C9JH25 899 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 K7EQS6 105 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 EEF2KO00418 725 aaKnown RBP17.22■□□□□ 0.35
SFXN5-220ENST00000490056 PI15O43692 258 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 KRT7P08729 469 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 CD48P09326 243 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 CHRNB1P11230 501 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 RHOQP17081 205 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 HOXC13P31276 330 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 ARSEP51690 589 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 CDH6P55285 790 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 SEC13P55735 322 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 MMRN1Q13201 1228 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 ZNF177Q13360 481 aaPredicted RBP17.22■□□□□ 0.35
SFXN5-220ENST00000490056 DPYSL2Q16555 572 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 IFI16Q16666 785 aaKnown RBP17.22■□□□□ 0.35
SFXN5-220ENST00000490056 ZFYVE27Q5T4F4 411 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 EMC10Q5UCC4 262 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 CXorf57Q6NSI4 855 aaKnown RBP17.22■□□□□ 0.35
SFXN5-220ENST00000490056 ZNF662Q6ZS27 426 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 RFX8Q6ZV50 586 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 NLRP14Q86W24 1093 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 CCDC117Q8IWD4 279 aaPredicted RBP17.22■□□□□ 0.35
SFXN5-220ENST00000490056 RHOT1Q8IXI2 618 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 RNF10Q8N5U6 811 aaKnown RBP17.22■□□□□ 0.35
SFXN5-220ENST00000490056 KCTD6Q8NC69 237 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 PJA1Q8NG27 643 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 RAPGEF5Q92565 580 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 EXOC4Q96A65 974 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 PBXIP1Q96AQ6 731 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 CALR3Q96L12 384 aaKnown RBP17.22■□□□□ 0.35
SFXN5-220ENST00000490056 LMAN1LQ9HAT1 526 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 NDFIP2Q9NV92 336 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 TRMT1Q9NXH9 659 aaKnown RBP17.22■□□□□ 0.35
SFXN5-220ENST00000490056 ZNF212Q9UDV6 495 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 GGA2Q9UJY4 613 aa17.22■□□□□ 0.35
SFXN5-220ENST00000490056 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
SFXN5-220ENST00000490056 A0A0A0MRY4 1105 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 DAPK3O43293 454 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 FTCDO95954 541 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 DCNP07585 359 aaKnown RBP17.21■□□□□ 0.35
SFXN5-220ENST00000490056 PABPC1P11940 636 aaKnown RBP17.21■□□□□ 0.35
SFXN5-220ENST00000490056 DRD1P21728 446 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 MZF1P28698 734 aaPredicted RBP17.21■□□□□ 0.35
SFXN5-220ENST00000490056 OR1E1P30953 314 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 CSKP41240 450 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 MARCKSL1P49006 195 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 CCINQ13939 588 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 KRT81Q14533 505 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 LRRC38Q5VT99 294 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 RNF219Q5W0B1 726 aaPredicted RBP17.21■□□□□ 0.35
SFXN5-220ENST00000490056 TMEM215Q68D42 235 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 POLNQ7Z5Q5 900 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 ANKS1BQ7Z6G8 1248 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 KIAA0907Q7Z7F0 614 aaPredicted RBP17.21■□□□□ 0.35
SFXN5-220ENST00000490056 SUGP1Q8IWZ8 645 aaKnown RBP17.21■□□□□ 0.35
SFXN5-220ENST00000490056 REXO1L1PQ8IX06 675 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 CCDC105Q8IYK2 499 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 APCDD1Q8J025 514 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.21■□□□□ 0.35
SFXN5-220ENST00000490056 NELL2Q99435 816 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 C11orf16Q9NQ32 467 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 TMEM248Q9NWD8 314 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 KIAA1522Q9P206 1035 aaPredicted RBP17.21■□□□□ 0.35
SFXN5-220ENST00000490056 DNAI1Q9UI46 699 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 INTS6Q9UL03 887 aaKnown RBP17.21■□□□□ 0.35
SFXN5-220ENST00000490056 TBC1D30Q9Y2I9 924 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 SIT1Q9Y3P8 196 aa17.21■□□□□ 0.35
SFXN5-220ENST00000490056 H3BRJ5 948 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 KRT1P04264 644 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 RHOCP08134 193 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 AMPD1P23109 780 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 KDELR1P24390 212 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 IL4RP24394 825 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 ARL4AP40617 200 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 DPYSL3Q14195 570 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 FUT11Q495W5 492 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 PREPLQ4J6C6 727 aaPredicted RBP17.2■□□□□ 0.34
SFXN5-220ENST00000490056 NT5DC3Q86UY8 548 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 ADIPOR2Q86V24 386 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 FAM71BQ8TC56 605 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 SORCS1Q8WY21 1168 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 TSC1Q92574 1164 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 KRT35Q92764 455 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 CSPG4P5Q96PW8 444 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 ZDHHC4Q9NPG8 344 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 HCN2Q9UL51 889 aa17.2■□□□□ 0.34
SFXN5-220ENST00000490056 A0A0D9SEW6 157 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms