RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 DUOXA1Q1HG43 343 aa18.4■□□□□ 0.54
ABCF3-217ENST00000489719 WDR45BQ5MNZ6 344 aa18.4■□□□□ 0.54
ABCF3-217ENST00000489719 APTXQ7Z2E3 356 aaKnown RBP18.4■□□□□ 0.54
ABCF3-217ENST00000489719 RABEPKQ7Z6M1 372 aa18.4■□□□□ 0.54
ABCF3-217ENST00000489719 KDM1BQ8NB78 822 aa18.4■□□□□ 0.54
ABCF3-217ENST00000489719 SLC30A5Q8TAD4 765 aa18.4■□□□□ 0.54
ABCF3-217ENST00000489719 IGSF8Q969P0 613 aa18.4■□□□□ 0.54
ABCF3-217ENST00000489719 HSPA12BQ96MM6 686 aa18.4■□□□□ 0.54
ABCF3-217ENST00000489719 TBCBQ99426 244 aa18.4■□□□□ 0.54
ABCF3-217ENST00000489719 GPR174Q9BXC1 333 aa18.4■□□□□ 0.54
ABCF3-217ENST00000489719 CD93Q9NPY3 652 aa18.4■□□□□ 0.54
ABCF3-217ENST00000489719 EVLQ9UI08 416 aaPredicted RBP18.4■□□□□ 0.54
ABCF3-217ENST00000489719 C4orf47A7E2U8 309 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 RNASEH1O60930 286 aaKnown RBP18.39■□□□□ 0.53
ABCF3-217ENST00000489719 DNTTP04053 509 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 CFIP05156 583 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 PDGFRAP16234 1089 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 TFE3P19532 575 aaPredicted RBP18.39■□□□□ 0.53
ABCF3-217ENST00000489719 MMP8P22894 467 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 NSFP46459 744 aaKnown RBP18.39■□□□□ 0.53
ABCF3-217ENST00000489719 ZBTB16Q05516 673 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 SULT2A1Q06520 285 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 PLEKHG6Q3KR16 790 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 ACBD5Q5T8D3 534 aaPredicted RBP18.39■□□□□ 0.53
ABCF3-217ENST00000489719 DAB2IPQ5VWQ8 1189 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 LRSAM1Q6UWE0 723 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 LRRC31Q6UY01 552 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 ARCQ7LC44 396 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 CIR1Q86X95 450 aaPredicted RBP18.39■□□□□ 0.53
ABCF3-217ENST00000489719 CACUL1Q86Y37 369 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 SLC41A1Q8IVJ1 513 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 DHX40Q8IX18 779 aaKnown RBP18.39■□□□□ 0.53
ABCF3-217ENST00000489719 APCDD1Q8J025 514 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 CADM4Q8NFZ8 388 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 SEPT11Q9NVA2 429 aaKnown RBP18.39■□□□□ 0.53
ABCF3-217ENST00000489719 ARHGEF38Q9NXL2 777 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 TMEM59LQ9UK28 342 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 SLC6A14Q9UN76 642 aa18.39■□□□□ 0.53
ABCF3-217ENST00000489719 ABCA7Q8IZY2 2146 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 DMXL1Q9Y485 3027 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 LNP1A1A4G5 178 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 CLDN11O75508 207 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 GNSP15586 552 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 FLT3P36888 993 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 CTSOP43234 321 aaPredicted RBP18.38■□□□□ 0.53
ABCF3-217ENST00000489719 ATXN3P54252 364 aaPredicted RBP18.38■□□□□ 0.53
ABCF3-217ENST00000489719 GFPT1Q06210 699 aaPredicted RBP18.38■□□□□ 0.53
ABCF3-217ENST00000489719 SFSWAPQ12872 951 aaKnown RBP18.38■□□□□ 0.53
ABCF3-217ENST00000489719 HNRNPA1L2Q32P51 320 aaKnown RBP18.38■□□□□ 0.53
ABCF3-217ENST00000489719 SLC23A3Q6PIS1 610 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 PHLDB2Q86SQ0 1253 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 C14orf80Q86SX3 495 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 FAM124AQ86V42 546 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 MRGPRX3Q96LB0 322 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 C1orf74Q96LT6 269 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 TMEM9BQ9NQ34 198 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 RTN4Q9NQC3 1192 aaKnown RBP18.38■□□□□ 0.53
ABCF3-217ENST00000489719 ADAM22Q9P0K1 906 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 SLCO3A1Q9UIG8 710 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 NCKAP1Q9Y2A7 1128 aa18.38■□□□□ 0.53
ABCF3-217ENST00000489719 ATXN2Q99700 1313 aaKnown RBP18.38■□□□□ 0.53
ABCF3-217ENST00000489719 TARSL2A2RTX5 802 aaKnown RBP18.37■□□□□ 0.53
ABCF3-217ENST00000489719 MEI4A8MW99 385 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 TEX33O43247 280 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 IGLV3-19P01714 112 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 UNGP13051 313 aaPredicted RBP18.37■□□□□ 0.53
ABCF3-217ENST00000489719 FERP16591 822 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 KCNA4P22459 653 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 MZF1P28698 734 aaPredicted RBP18.37■□□□□ 0.53
ABCF3-217ENST00000489719 RDXP35241 583 aaKnown RBP18.37■□□□□ 0.53
ABCF3-217ENST00000489719 PLK1P53350 603 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 CDH4P55283 916 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 RPS14P62263 151 aaKnown RBP18.37■□□□□ 0.53
ABCF3-217ENST00000489719 CENPCQ03188 943 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 OTUD1Q5VV17 481 aaPredicted RBP18.37■□□□□ 0.53
ABCF3-217ENST00000489719 PEAR1Q5VY43 1037 aaPredicted RBP18.37■□□□□ 0.53
ABCF3-217ENST00000489719 ZNF776Q68DI1 518 aaPredicted RBP18.37■□□□□ 0.53
ABCF3-217ENST00000489719 GANCQ8TET4 914 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 MYO19Q96H55 970 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 RPL10LQ96L21 214 aaKnown RBP18.37■□□□□ 0.53
ABCF3-217ENST00000489719 CFAP57Q96MR6 1250 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 PCDHB18PQ96TA0 734 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 AGPAT1Q99943 283 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 C11orf70Q9BRQ4 267 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 ADAM33Q9BZ11 813 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 MTG2Q9H4K7 406 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 METTL5Q9NRN9 209 aaKnown RBP18.37■□□□□ 0.53
ABCF3-217ENST00000489719 SUSD2Q9UGT4 822 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 CEP250Q9BV73 2442 aa18.37■□□□□ 0.53
ABCF3-217ENST00000489719 EDDM13A0A1B0GTR0 161 aa18.36■□□□□ 0.53
ABCF3-217ENST00000489719 METTL12A8MUP2 240 aa18.36■□□□□ 0.53
ABCF3-217ENST00000489719 TTC34A8MYJ7 566 aa18.36■□□□□ 0.53
ABCF3-217ENST00000489719 SIN3BO75182 1162 aa18.36■□□□□ 0.53
ABCF3-217ENST00000489719 SERPINF2P08697 491 aa18.36■□□□□ 0.53
ABCF3-217ENST00000489719 KRT3P12035 628 aa18.36■□□□□ 0.53
ABCF3-217ENST00000489719 PTMSP20962 102 aa18.36■□□□□ 0.53
ABCF3-217ENST00000489719 MAOBP27338 520 aa18.36■□□□□ 0.53
ABCF3-217ENST00000489719 SDC4P31431 198 aa18.36■□□□□ 0.53
ABCF3-217ENST00000489719 GGCXP38435 758 aa18.36■□□□□ 0.53
ABCF3-217ENST00000489719 TPM4P67936 248 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms