RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 HAPLN1P10915 354 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 MYL4P12829 197 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 ACAT1P24752 427 aaKnown RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 DNAJA1P31689 397 aaKnown RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 GNL1P36915 607 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 MAGEA11P43364 429 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 CASP4P49662 377 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 MYL6P60660 151 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 YWHAEP62258 255 aaKnown RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 NOP14P78316 857 aaKnown RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 NTHL1P78549 312 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 PAK1Q13153 545 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 SLC9A5Q14940 896 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 SLC5A9Q2M3M2 681 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 DCAF17Q5H9S7 520 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 GTF2IRD2BQ6EKJ0 949 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 FAM171BQ6P995 826 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 LIMS2Q7Z4I7 341 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 FRMD5Q7Z6J6 570 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 DNAJB7Q7Z6W7 309 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 GTF2IRD2Q86UP8 949 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 SLC44A3Q8N4M1 653 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 ATAD1Q8NBU5 361 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 NETO2Q8NC67 525 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 B3GALNT2Q8NCR0 500 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 FBXL13Q8NEE6 735 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 KBTBD7Q8WVZ9 684 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 ING5Q8WYH8 240 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 MRPS31Q92665 395 aaKnown RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 DNASE1L2Q92874 299 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 SMARCD2Q92925 531 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 EXOC4Q96A65 974 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 ELSPBP1Q96BH3 223 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 TRMT2BQ96GJ1 504 aaKnown RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 MSANTD3Q96H12 275 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 CCDC140Q96MF4 163 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 IPO9Q96P70 1041 aaKnown RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 MYADMQ96S97 322 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 TMEM209Q96SK2 561 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 RTP3Q9BQQ7 232 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 MCMBPQ9BTE3 642 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 LRFN3Q9BTN0 628 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 RNF38Q9H0F5 515 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 XYLT2Q9H1B5 865 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 KIF9Q9HAQ2 790 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 CYP3A43Q9HB55 503 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 TRPV4Q9HBA0 871 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 SLC2A4RGQ9NR83 387 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 HCFC1R1Q9NWW0 138 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 OBP2AQ9NY56 170 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 CEP72Q9P209 647 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 ARMCX3Q9UH62 379 aaPredicted RBP5.42□□□□□ -1.54
SF3A3-207ENST00000488934 GTF3C4Q9UKN8 822 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 KMT2EQ8IZD2 1858 aa5.42□□□□□ -1.54
SF3A3-207ENST00000488934 PATJQ8NI35 1801 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 MYO16Q9Y6X6 1858 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 ANAPC1Q9H1A4 1944 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 BDP1A6H8Y1 2624 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 PMM2O15305 246 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 P4HA2O15460 535 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 BUB1BO60566 1050 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-207ENST00000488934 NOL4O94818 638 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 RTN3O95197 1032 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-207ENST00000488934 VNN2O95498 520 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 HLA-DRAP01903 254 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 CCDC192P0DO97 292 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 CEBPBP17676 345 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 PSMC3P17980 439 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 PTPN1P18031 435 aaKnown RBP5.41□□□□□ -1.54
SF3A3-207ENST00000488934 ATF6P18850 670 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 TBXAS1P24557 533 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-207ENST00000488934 GABRR2P28476 465 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 AVPR1AP37288 418 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 MAGEA9P43362 315 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 GCLMP48507 274 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 CLCN5P51795 746 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 AFF3P51826 1226 aaKnown RBP5.41□□□□□ -1.54
SF3A3-207ENST00000488934 SLC8A3P57103 927 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 MORC3Q14149 939 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 SSPNQ14714 243 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 TEAD2Q15562 447 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 CCDC40Q4G0X9 1142 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 CT47A1Q5JQC4 288 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-207ENST00000488934 E4F1Q66K89 784 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-207ENST00000488934 ANKRD40Q6AI12 368 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 KLHL10Q6JEL2 608 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 PARM1Q6UWI2 310 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 FILIP1Q7Z7B0 1213 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 LRRTM3Q86VH5 581 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 TMC8Q8IU68 726 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 FAM114A1Q8IWE2 563 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 ZC3H3Q8IXZ2 948 aaKnown RBP5.41□□□□□ -1.54
SF3A3-207ENST00000488934 YAF2Q8IY57 180 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 TTC9BQ8N6N2 239 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 ZNF513Q8N8E2 541 aaPredicted RBP5.41□□□□□ -1.54
SF3A3-207ENST00000488934 MLKLQ8NB16 471 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 ITFG1Q8TB96 612 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 MYCBPAPQ8TBZ2 947 aa5.41□□□□□ -1.54
SF3A3-207ENST00000488934 NELFBQ8WX92 580 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms