RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 P2RY11Q96G91 374 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 OSBPL9Q96SU4 736 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 HEMGNQ9BXL5 484 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 OSBPL8Q9BZF1 889 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 CARD9Q9H257 536 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.67□□□□□ -0.38
TRAIP-209ENST00000488860 DRGXA6NNA5 263 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 GFRA2O00451 464 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 HOXC11O43248 304 aaPredicted RBP12.67□□□□□ -0.38
TRAIP-209ENST00000488860 RHOCP08134 193 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 OR1E1P30953 314 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 CDH4P55283 916 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 COPS2P61201 443 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 KDSRQ06136 332 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 ZNF177Q13360 481 aaPredicted RBP12.67□□□□□ -0.38
TRAIP-209ENST00000488860 TDGQ13569 410 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 PPP2R5EQ16537 467 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 ITPRIPL2Q3MIP1 535 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 NCBP2-AS2Q69YL0 99 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 TMCO3Q6UWJ1 677 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 CHST9Q7L1S5 443 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 ADAT2Q7Z6V5 191 aaKnown RBP12.67□□□□□ -0.38
TRAIP-209ENST00000488860 ZNF354CQ86Y25 554 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 RTL3Q8N8U3 475 aaKnown RBP12.67□□□□□ -0.38
TRAIP-209ENST00000488860 NETO2Q8NC67 525 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 PCDH19Q8TAB3 1148 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 WFDC5Q8TCV5 224 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 HAUS1Q96CS2 278 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 FAF2Q96CS3 445 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 CAPZA3Q96KX2 299 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 RNF157Q96PX1 679 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 XPO6Q96QU8 1125 aaKnown RBP12.67□□□□□ -0.38
TRAIP-209ENST00000488860 ETNK2Q9NVF9 386 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 TMEM248Q9NWD8 314 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 MARK1Q9P0L2 795 aa12.67□□□□□ -0.38
TRAIP-209ENST00000488860 OTOL1A6NHN0 477 aaPredicted RBP12.66□□□□□ -0.38
TRAIP-209ENST00000488860 ZNF487B1APH4 448 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 ARNTLO00327 626 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 DCLK1O15075 740 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 ZNF185O15231 689 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 MFSD11O43934 449 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 CST8O60676 142 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 CLDN11O75508 207 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 MAP3K6O95382 1288 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 PENKP01210 267 aaPredicted RBP12.66□□□□□ -0.38
TRAIP-209ENST00000488860 BMP1P13497 986 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 TCP1P17987 556 aaKnown RBP12.66□□□□□ -0.38
TRAIP-209ENST00000488860 IL4RP24394 825 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 SERPINB6P35237 376 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 SOX9P48436 509 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 HCAR3P49019 387 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 TFDP2Q14188 446 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 C5orf22Q49AR2 442 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 ARTNQ5T4W7 220 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 C1orf228Q6PIY5 440 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 NPNTQ6UXI9 565 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 NLRP14Q86W24 1093 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 C12orf40Q86WS4 652 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 VSIG1Q86XK7 387 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 CCDC33Q8N5R6 958 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 NPWQ8N729 165 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 PQLC3Q8N755 202 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 CELF6Q96J87 481 aaKnown RBP12.66□□□□□ -0.38
TRAIP-209ENST00000488860 MS4A14Q96JA4 679 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 PBKQ96KB5 322 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 HERPUD2Q9BSE4 406 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 NDFIP2Q9NV92 336 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 DNAJC17Q9NVM6 304 aaKnown RBP12.66□□□□□ -0.38
TRAIP-209ENST00000488860 CLEC4EQ9ULY5 219 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 SAR1BQ9Y6B6 198 aa12.66□□□□□ -0.38
TRAIP-209ENST00000488860 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 WASH4PA8MWX3 477 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 DFFAO00273 331 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 ZNF500O60304 480 aaPredicted RBP12.65□□□□□ -0.38
TRAIP-209ENST00000488860 CACNG3O60359 315 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 TJP3O95049 919 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 TUBB4AP04350 444 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 SRFP11831 508 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 ZFXP17010 805 aaPredicted RBP12.65□□□□□ -0.38
TRAIP-209ENST00000488860 GJA4P35212 333 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 PTPN7P35236 360 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 CSKP41240 450 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 MAPKAPK2P49137 400 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 PFKPQ01813 784 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 TAZQ16635 292 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 LONRF2Q1L5Z9 754 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 DNTTIP2Q5QJE6 756 aaKnown RBP12.65□□□□□ -0.38
TRAIP-209ENST00000488860 MPP7Q5T2T1 576 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 C6orf118Q5T5N4 469 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 RNF219Q5W0B1 726 aaPredicted RBP12.65□□□□□ -0.38
TRAIP-209ENST00000488860 PAPD7Q5XG87 772 aaKnown RBP12.65□□□□□ -0.38
TRAIP-209ENST00000488860 RNF135Q8IUD6 432 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRAIP-209ENST00000488860 COG1Q8WTW3 980 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 DNASE1L2Q92874 299 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 NECAB3Q96P71 396 aaPredicted RBP12.65□□□□□ -0.38
TRAIP-209ENST00000488860 MUC3BQ9H195 1237 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 HEBP1Q9NRV9 189 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 ABCB8Q9NUT2 735 aa12.65□□□□□ -0.38
TRAIP-209ENST00000488860 SMARCAL1Q9NZC9 954 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms