RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 ARHGEF4Q9NR80 690 aa7.79□□□□□ -1.16
APOBEC3A-203ENST00000488758 SAE1Q9UBE0 346 aaPredicted RBP7.79□□□□□ -1.16
APOBEC3A-203ENST00000488758 PPARGC1AQ9UBK2 798 aaKnown RBP7.79□□□□□ -1.16
APOBEC3A-203ENST00000488758 AMACRQ9UHK6 382 aa7.79□□□□□ -1.16
APOBEC3A-203ENST00000488758 AGO1Q9UL18 857 aaKnown RBP7.79□□□□□ -1.16
APOBEC3A-203ENST00000488758 VANGL2Q9ULK5 521 aa7.79□□□□□ -1.16
APOBEC3A-203ENST00000488758 ARHGAP26Q9UNA1 814 aa7.79□□□□□ -1.16
APOBEC3A-203ENST00000488758 ANAPC1Q9H1A4 1944 aa7.79□□□□□ -1.16
APOBEC3A-203ENST00000488758 TYW5A2RUC4 315 aaKnown RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 DRGXA6NNA5 263 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 WASH4PA8MWX3 477 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 HACD1B0YJ81 288 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 SGK1O00141 431 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 LEFTY2O00292 366 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 PPP1R12AO14974 1030 aaPredicted RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 DCLK1O15075 740 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 LINC01565O15544 149 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 TTI1O43156 1089 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 CTIFO43310 598 aaKnown RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 RAD51CO43502 376 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 PAPLNO95428 1278 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 GAS8O95995 478 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 KLKB1P03952 638 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 TUBBP07437 444 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 RBP3P10745 1247 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 PECAM1P16284 738 aaPredicted RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 RHOQP17081 205 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 MX2P20592 715 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 STIP1P31948 543 aaKnown RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 VCPP55072 806 aaKnown RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 MRPS25P82663 173 aaKnown RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 GBE1Q04446 702 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 XRCC4Q13426 336 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 CBX2Q14781 532 aaPredicted RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 PDK1Q15118 436 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 NOMO1Q15155 1222 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 SLC5A9Q2M3M2 681 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 ADGRF1Q5T601 910 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 MANEALQ5VSG8 457 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 NADSYN1Q6IA69 706 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 TTC27Q6P3X3 843 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 SYCE2Q6PIF2 218 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 SYDE1Q6ZW31 735 aaPredicted RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 HTR3DQ70Z44 454 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 ZC3H18Q86VM9 953 aaKnown RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 CDKL3Q8IVW4 592 aaPredicted RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 IFT20Q8IY31 132 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 LZTR1Q8N653 840 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 CCNYQ8ND76 341 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 SLC35B2Q8TB61 432 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 SH3RF2Q8TEC5 729 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 ING5Q8WYH8 240 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 NKD2Q969F2 451 aaPredicted RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 GAS2L1Q99501 681 aaPredicted RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 PRMT1Q99873 361 aaKnown RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 RAB17Q9H0T7 212 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 SMG9Q9H0W8 520 aaKnown RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 TTYH1Q9H313 450 aaPredicted RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 RETREG1Q9H6L5 497 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 TDP1Q9NUW8 608 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 ETNK2Q9NVF9 386 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 CLDND1Q9NY35 253 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 MPP6Q9NZW5 540 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 CFAP97Q9P2B7 532 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 PCYOX1Q9UHG3 505 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 DNPEPQ9ULA0 475 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 UTP11Q9Y3A2 253 aaKnown RBP7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 RAD54BQ9Y620 910 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 MTCH2Q9Y6C9 303 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 CHD9Q3L8U1 2897 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 DENND4CQ5VZ89 1909 aa7.78□□□□□ -1.16
APOBEC3A-203ENST00000488758 IGLV3-10A0A075B6K4 115 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 E2F8A0AVK6 867 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 TARSL2A2RTX5 802 aaKnown RBP7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 CFAP69A5D8W1 941 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 NRG2O14511 850 aaPredicted RBP7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 TRDMT1O14717 391 aaKnown RBP7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 NCAM2O15394 837 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 TSPAN3O60637 253 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 ZNF189O75820 626 aaPredicted RBP7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 HEXIM1O94992 359 aaKnown RBP7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 MAP3K6O95382 1288 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 GLP2RO95838 553 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 KRT14P02533 472 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 CYBBP04839 570 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 ITGAVP06756 1048 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 CEBPBP17676 345 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 POU3F3P20264 500 aaPredicted RBP7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 MCM3P25205 808 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 OR1E1P30953 314 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 HOXC13P31276 330 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 ACTN2P35609 894 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 CHKAP35790 457 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 PTGIRP43119 386 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 GUCY2DQ02846 1103 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 SLC10A2Q12908 348 aaPredicted RBP7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 NAA30Q147X3 362 aaPredicted RBP7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 ELF2Q15723 593 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 RFWD3Q6PCD5 774 aa7.77□□□□□ -1.17
APOBEC3A-203ENST00000488758 JAMLQ86YT9 394 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms