RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 IGSF9Q9P2J2 1179 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 KLHL13Q9P2N7 655 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 TAGLN3Q9UI15 199 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 C19orf53Q9UNZ5 99 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-214ENST00000488427 BTBD3Q9Y2F9 522 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 ZBTB1Q9Y2K1 713 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 TIAM1Q13009 1591 aa4.89□□□□□ -1.63
ITGB1-214ENST00000488427 FAM135AQ9P2D6 1515 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 DIP2AQ14689 1571 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 DNAJC9-AS1A6NH13 148 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 LGALS16A8MUM7 142 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 PRPF4O43172 522 aaKnown RBP eCLIP4.88□□□□□ -1.63
ITGB1-214ENST00000488427 DNPH1O43598 174 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 ACTL6BO94805 426 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 FGBP02675 491 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 MBPP02686 304 aaPredicted RBP4.88□□□□□ -1.63
ITGB1-214ENST00000488427 TMEM191BP0C7N4 346 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 SERPINF1P36955 418 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 KCNJ4P48050 445 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 AGTR2P50052 363 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 AP2B1P63010 937 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 SSBP2P81877 361 aaPredicted RBP4.88□□□□□ -1.63
ITGB1-214ENST00000488427 FOXO1Q12778 655 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 SF3A3Q12874 501 aaKnown RBP eCLIP4.88□□□□□ -1.63
ITGB1-214ENST00000488427 GRM4Q14833 912 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 RPS6KA2Q15349 733 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 SUPT20HL1Q3ZLR7 823 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 TRIM60Q495X7 471 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 AWAT1Q58HT5 328 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 KYAT3Q6YP21 454 aaKnown RBP4.88□□□□□ -1.63
ITGB1-214ENST00000488427 VPS37AQ8NEZ2 397 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 HMGB4Q8WW32 186 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 NPIPB3Q92617 1050 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 CELF1Q92879 486 aaKnown RBP4.88□□□□□ -1.63
ITGB1-214ENST00000488427 PRR11Q96HE9 360 aaPredicted RBP4.88□□□□□ -1.63
ITGB1-214ENST00000488427 SIGLEC11Q96RL6 698 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 ABHD14AQ9BUJ0 271 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 FSCN3Q9NQT6 498 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 KDM5AP29375 1690 aaKnown RBP4.88□□□□□ -1.63
ITGB1-214ENST00000488427 KIDINS220Q9ULH0 1771 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 UTRNP46939 3433 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 PLCH2O75038 1416 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 KIF27Q86VH2 1401 aa4.88□□□□□ -1.63
ITGB1-214ENST00000488427 MAP3K1Q13233 1512 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 UGGT1Q9NYU2 1555 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 WDR91A4D1P6 747 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 DPPA5A6NC42 116 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 AQP12BA6NM10 295 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 PRYO14603 147 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 RPP40O75818 363 aaKnown RBP4.87□□□□□ -1.63
ITGB1-214ENST00000488427 CYP3A4P08684 503 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 ZNF81P51508 661 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 CFHR1Q03591 330 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 ZNF91Q05481 1191 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 RNASELQ05823 741 aaKnown RBP4.87□□□□□ -1.63
ITGB1-214ENST00000488427 GPR162Q16538 588 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 LIPMQ5VYY2 423 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 ERAP2Q6P179 960 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 DHRS13Q6UX07 377 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 LRIG3Q6UXM1 1119 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 ZNF793Q6ZN11 406 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 FAM57BQ71RH2 274 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 SLC44A2Q8IWA5 706 aaPredicted RBP4.87□□□□□ -1.63
ITGB1-214ENST00000488427 ATG16L2Q8NAA4 619 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 ZFPM2Q8WW38 1151 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 ELOVL1Q9BW60 279 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 VPS16Q9H269 839 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 PAPOLBQ9NRJ5 636 aaKnown RBP4.87□□□□□ -1.63
ITGB1-214ENST00000488427 TRNAU1APQ9NX07 287 aaKnown RBP4.87□□□□□ -1.63
ITGB1-214ENST00000488427 TMEM94Q12767 1356 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 ZMYM2Q9UBW7 1377 aa4.87□□□□□ -1.63
ITGB1-214ENST00000488427 RGPD1P0DJD0 1748 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 HNRNPRO43390 633 aaKnown RBP4.86□□□□□ -1.63
ITGB1-214ENST00000488427 PDIA3P30101 505 aaKnown RBP4.86□□□□□ -1.63
ITGB1-214ENST00000488427 STAT1P42224 750 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 STAT6P42226 847 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 ZNF84P51523 738 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 OAZ1P54368 228 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 TAS2R50P59544 299 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 YPEL5P62699 121 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 DMWDQ09019 674 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 ISM2Q6H9L7 571 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 SLC2A7Q6PXP3 512 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 NANOGP1Q8N7R0 232 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 C16orf52Q8NHV5 167 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 STYXQ8WUJ0 223 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 RUBCNQ92622 972 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 HMCESQ96FZ2 354 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 TRMOQ9BU70 441 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 C1QTNF7Q9BXJ2 289 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 ELAC1Q9H777 363 aaKnown RBP4.86□□□□□ -1.63
ITGB1-214ENST00000488427 SAYSD1Q9NPB0 183 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 CNTN6Q9UQ52 1028 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 MLH3Q9UHC1 1453 aa4.86□□□□□ -1.63
ITGB1-214ENST00000488427 LOC105369274A0A096LPK9 316 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 LOC102723532A0A0G2JNH3 316 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 ACKR2O00590 384 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 SEPT4O43236 478 aa4.85□□□□□ -1.63
ITGB1-214ENST00000488427 LDHAP00338 332 aaKnown RBP4.85□□□□□ -1.63
ITGB1-214ENST00000488427 CTSAP10619 480 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms