RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CCDC117Q8IWD4 279 aaPredicted RBP4.63□□□□□ -1.67
LINC00888-204ENST00000487386 ENAHQ8N8S7 591 aaPredicted RBP4.63□□□□□ -1.67
LINC00888-204ENST00000487386 KAT2AQ92830 837 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 ZBTB9Q96C00 473 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 CLMNQ96JQ2 1002 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 WDR83Q9BRX9 315 aaKnown RBP4.63□□□□□ -1.67
LINC00888-204ENST00000487386 TMEM120AQ9BXJ8 343 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 OSBPL5Q9H0X9 879 aaPredicted RBP4.63□□□□□ -1.67
LINC00888-204ENST00000487386 ELAC1Q9H777 363 aaKnown RBP4.63□□□□□ -1.67
LINC00888-204ENST00000487386 SPAG4Q9NPE6 437 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 SLC22A11Q9NSA0 550 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 POT1Q9NUX5 634 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.63□□□□□ -1.67
LINC00888-204ENST00000487386 GRHPRQ9UBQ7 328 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 UTS2RQ9UKP6 389 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 LAMP3Q9UQV4 416 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 DTX4Q9Y2E6 619 aa4.63□□□□□ -1.67
LINC00888-204ENST00000487386 A0A1W2PPC1 479 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 FAM90A20PA6NIJ5 464 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 AGAP5A6NIR3 686 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 TULP3O75386 442 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 EPN2O95208 641 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 TRIM14Q14142 442 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 SEMA3AQ14563 771 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 DLGAP5Q15398 846 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 SMTNL2Q2TAL5 461 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 ERAP2Q6P179 960 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 CCDC174Q6PII3 467 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 KIAA1324Q6UXG2 1013 aaKnown RBP4.62□□□□□ -1.67
LINC00888-204ENST00000487386 LRIG3Q6UXM1 1119 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 RINLQ6ZS11 566 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 DDIASQ8IXT1 998 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 CPT1BQ92523 772 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 RPS6KC1Q96S38 1066 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 BRD8Q9H0E9 1235 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 NDUFAF4Q9P032 175 aa4.62□□□□□ -1.67
LINC00888-204ENST00000487386 IGLV5-39A0A0G2JS06 123 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 TOMM40O96008 361 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 PSG1P11464 419 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 CST5P28325 142 aaPredicted RBP4.61□□□□□ -1.67
LINC00888-204ENST00000487386 SERPINA4P29622 427 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 RNASELQ05823 741 aaKnown RBP4.61□□□□□ -1.67
LINC00888-204ENST00000487386 FAM83BQ5T0W9 1011 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 C10orf76Q5T2E6 689 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 LCE1AQ5T7P2 110 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 DGAT2L7PQ6IED9 249 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 JMJD6Q6NYC1 403 aaPredicted RBP4.61□□□□□ -1.67
LINC00888-204ENST00000487386 TECPR1Q7Z6L1 1165 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 ZNF366Q8N895 744 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 C9orf106Q8NAJ2 232 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 EME1Q96AY2 570 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 TRAPPC9Q96Q05 1148 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 ARHGAP39Q9C0H5 1083 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 SRP68Q9UHB9 627 aaKnown RBP4.61□□□□□ -1.67
LINC00888-204ENST00000487386 RCE1Q9Y256 329 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 PKP3Q9Y446 797 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 COMMD10Q9Y6G5 202 aa4.61□□□□□ -1.67
LINC00888-204ENST00000487386 DPPA5A6NC42 116 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 FOXO6A8MYZ6 492 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 H0Y3Z8 333 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 IPO5O00410 1097 aaKnown RBP4.6□□□□□ -1.67
LINC00888-204ENST00000487386 FAM155BO75949 473 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 NEURL1O76050 574 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 NDUFB8O95169 186 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 NTN1O95631 604 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 LDHAP00338 332 aaKnown RBP4.6□□□□□ -1.67
LINC00888-204ENST00000487386 PRPH2P23942 346 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 ALDH7A1P49419 539 aaKnown RBP4.6□□□□□ -1.67
LINC00888-204ENST00000487386 LINC00205P59089 165 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 OS9Q13438 667 aaPredicted RBP4.6□□□□□ -1.67
LINC00888-204ENST00000487386 BIRC2Q13490 618 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 RPS6KA2Q15349 733 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 INPP5JQ15735 1006 aaPredicted RBP4.6□□□□□ -1.67
LINC00888-204ENST00000487386 ZNF260Q3ZCT1 412 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 EPHA10Q5JZY3 1008 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 MANEAQ5SRI9 462 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 C10orf62Q5T681 223 aaPredicted RBP4.6□□□□□ -1.67
LINC00888-204ENST00000487386 PIM3Q86V86 326 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 ENDOVQ8N8Q3 282 aaKnown RBP4.6□□□□□ -1.67
LINC00888-204ENST00000487386 FAM110DQ8TAY7 271 aaPredicted RBP4.6□□□□□ -1.67
LINC00888-204ENST00000487386 IP6K1Q92551 441 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 ADAD1Q96M93 576 aaKnown RBP4.6□□□□□ -1.67
LINC00888-204ENST00000487386 PDE11AQ9HCR9 933 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 DECR2Q9NUI1 292 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 COG5Q9UP83 839 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 TNFSF13BQ9Y275 285 aa4.6□□□□□ -1.67
LINC00888-204ENST00000487386 CXorf65A6NEN9 183 aa4.59□□□□□ -1.67
LINC00888-204ENST00000487386 A6NNC1 897 aa4.59□□□□□ -1.67
LINC00888-204ENST00000487386 RHODO00212 210 aa4.59□□□□□ -1.67
LINC00888-204ENST00000487386 GRM8O00222 908 aa4.59□□□□□ -1.67
LINC00888-204ENST00000487386 HNRNPRO43390 633 aaKnown RBP4.59□□□□□ -1.67
LINC00888-204ENST00000487386 NFATC1O95644 943 aa4.59□□□□□ -1.67
LINC00888-204ENST00000487386 LCKP06239 509 aa4.59□□□□□ -1.67
LINC00888-204ENST00000487386 HOXB9P17482 250 aaPredicted RBP4.59□□□□□ -1.67
LINC00888-204ENST00000487386 CIITAP33076 1130 aa4.59□□□□□ -1.67
LINC00888-204ENST00000487386 CHKAP35790 457 aa4.59□□□□□ -1.67
LINC00888-204ENST00000487386 PCP4P48539 62 aa4.59□□□□□ -1.67
LINC00888-204ENST00000487386 FOXG1P55316 489 aaPredicted RBP4.59□□□□□ -1.67
LINC00888-204ENST00000487386 RHAGQ02094 409 aa4.59□□□□□ -1.67
LINC00888-204ENST00000487386 ZBTB16Q05516 673 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms