RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 PIK3R2O00459 728 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 ITM2AO43736 263 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 FBXO21O94952 628 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 HSPA4LO95757 839 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 AP2A1O95782 977 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 COX4I1P13073 169 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 VAV1P15498 845 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 GOT1P17174 413 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 BAG6P46379 1132 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 HSPA13P48723 471 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 SESN2P58004 480 aaPredicted RBP12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 SCAPQ12770 1279 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 FBXO47Q5MNV8 452 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 C9orf57Q5W0N0 161 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 NOTUMQ6P988 496 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 LIMS2Q7Z4I7 341 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 CLEC14AQ86T13 490 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 KBTBD6Q86V97 674 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 GSTCDQ8NEC7 633 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 RP9Q8TA86 221 aaKnown RBP12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 SLC7A14Q8TBB6 771 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 DLG3Q92796 817 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 PGBD4Q96DM1 585 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 ZNF395Q9H8N7 513 aaPredicted RBP12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 STK39Q9UEW8 545 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 POMPQ9Y244 141 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 TBC1D30Q9Y2I9 924 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 PAPPA2Q9BXP8 1791 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 GABBR2O75899 941 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 PGK2P07205 417 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 PABPC4LP0CB38 370 aaKnown RBP12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 SERPINB5P36952 375 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 GRIA1P42261 906 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 IGBP1P78318 339 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 SLC25A3Q00325 362 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 ITGA9Q13797 1035 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 UGP2Q16851 508 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 SOWAHAQ2M3V2 549 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 SH2D4BQ5SQS7 431 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 RNF220Q5VTB9 566 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 ALKAL1Q6UXT8 129 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 ZNF467Q7Z7K2 595 aaPredicted RBP12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 CPSF7Q8N684 471 aaKnown RBP12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 CCDC185Q8N715 623 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 TRPM4Q8TD43 1214 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 SLC26A7Q8TE54 656 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 CLPTM1LQ96KA5 538 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 HNRNPABQ99729 332 aaKnown RBP12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 B3GNT5Q9BYG0 378 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 IL22Q9GZX6 179 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 TMEM216Q9P0N5 145 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 RBPJLQ9UBG7 517 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 VANGL2Q9ULK5 521 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 RAP2CQ9Y3L5 183 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 RGSL1A5PLK6 1076 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 PIRO00625 290 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 CABYRO75952 493 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 HOXD8P13378 290 aaPredicted RBP12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 SULT1E1P49888 294 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 TBL3Q12788 808 aaKnown RBP12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 ILF2Q12905 390 aaKnown RBP12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 CCNIQ14094 377 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 DPYSQ14117 519 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 SV2CQ496J9 727 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 LIN52Q52LA3 116 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 C16orf46Q6P387 395 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 LINC00523Q86TU6 105 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 TOP6BLQ8N6T0 577 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 ICA1LQ8NDH6 482 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 PDCD6IPQ8WUM4 868 aaKnown RBP12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 AZIN2Q96A70 460 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 ZNF668Q96K58 619 aaPredicted RBP12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 NPY6RQ99463 290 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 MRM3Q9HC36 420 aaKnown RBP12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 CASS4Q9NQ75 786 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 SYBUQ9NX95 663 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 PLK2Q9NYY3 685 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 PSMD13Q9UNM6 376 aa12.68□□□□□ -0.38
TMEM39B-208ENST00000487305 HDAC3O15379 428 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 DENRO43583 198 aaKnown RBP12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 MFSD11O43934 449 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 LYPLA1O75608 230 aaPredicted RBP12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 VTNP04004 478 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 PRKCGP05129 697 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 KCNE1P15382 129 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 VCLP18206 1134 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 NCF2P19878 526 aaPredicted RBP12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 ITGAXP20702 1163 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 GLDCP23378 1020 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 CCNA1P78396 465 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 KLF10Q13118 480 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 PRKAA1Q13131 559 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 PPIL2Q13356 520 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 THEMIS2Q5TEJ8 643 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 RASIP1Q5U651 963 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 RFX8Q6ZV50 586 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 MAVSQ7Z434 540 aa12.67□□□□□ -0.38
TMEM39B-208ENST00000487305 ANKRD13AQ8IZ07 590 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms