RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 ITGA8P53708 1063 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 CDH4P55283 916 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 OXCT1P55809 520 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 EIF3BP55884 814 aaKnown RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 SMAD3P84022 425 aaKnown RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 DHX9Q08211 1270 aaKnown RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 AP1B1Q10567 949 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 SLC10A2Q12908 348 aaPredicted RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 CASP8Q14790 479 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 TRIP13Q15645 432 aaPredicted RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 PARP15Q460N3 678 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 HSP90B2PQ58FF3 399 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 ADGRF1Q5T601 910 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 COL13A1Q5TAT6 717 aaPredicted RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 PIK3R6Q5UE93 754 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 ITPRIPL1Q6GPH6 555 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 HIBCHQ6NVY1 386 aaPredicted RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 ZNF783Q6ZMS7 281 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 ARHGEF18Q6ZSZ5 1173 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 SPATA31D4Q6ZUB0 917 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 CENPUQ71F23 418 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 TRMT10CQ7L0Y3 403 aaKnown RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 CHST9Q7L1S5 443 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 TMC8Q8IU68 726 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 RELL1Q8IUW5 271 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 CCDC117Q8IWD4 279 aaPredicted RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 CCDC13Q8IYE1 715 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 UMODL1-AS1Q8N2C9 162 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 ZCCHC9Q8N567 271 aaKnown RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 ATPAF2Q8N5M1 289 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 ZNF557Q8N988 423 aaPredicted RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 FBXO25Q8TCJ0 367 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 SLC22A17Q8WUG5 538 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 EXOC4Q96A65 974 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 SPATA13Q96N96 652 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 TTC25Q96NG3 672 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 RPRD1AQ96P16 312 aaPredicted RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 PRMT1Q99873 361 aaKnown RBP7.4□□□□□ -1.22
CCNB3-206ENST00000487204 FAM118BQ9BPY3 351 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 CORO1BQ9BR76 489 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 FUT8Q9BYC5 575 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 PBX4Q9BYU1 374 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 PRKD2Q9BZL6 878 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 ATXN3LQ9H3M9 355 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 PRDM12Q9H4Q4 367 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 TLE6Q9H808 572 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 IL21Q9HBE4 155 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 TRPC7Q9HCX4 862 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 ANLNQ9NQW6 1124 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 TMPRSS4Q9NRS4 437 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 VANGL2Q9ULK5 521 aa7.4□□□□□ -1.22
CCNB3-206ENST00000487204 KIAA1671Q9BY89 1806 aa7.4□□□□□ -1.23
CCNB3-206ENST00000487204 MYO16Q9Y6X6 1858 aa7.4□□□□□ -1.23
CCNB3-206ENST00000487204 C2orf78A6NCI8 922 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 GRXCR1A8MXD5 290 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 E7EVH7 732 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 I6L893 689 aaPredicted RBP7.39□□□□□ -1.23
CCNB3-206ENST00000487204 CCL16O15467 120 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 OPA1O60313 960 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 RAMP2O60895 175 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 STC2O76061 302 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 CKMP06732 381 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 HMBSP08397 361 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 MYL4P12829 197 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 MYOGP15173 224 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 TCF3P15923 654 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 TSHRP16473 764 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 ECHS1P30084 290 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 WEE1P30291 646 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 CORO1AP31146 461 aaKnown RBP7.39□□□□□ -1.23
CCNB3-206ENST00000487204 RPL22P35268 128 aaKnown RBP7.39□□□□□ -1.23
CCNB3-206ENST00000487204 AVPR1AP37288 418 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 MAGEA6P43360 314 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 VPS41P49754 854 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 RENBPP51606 427 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 PMS2P54278 862 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 ARL4CP56559 192 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 BASP1P80723 227 aaKnown RBP7.39□□□□□ -1.23
CCNB3-206ENST00000487204 CBLBQ13191 982 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 CAMK1Q14012 370 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 PRPSAP1Q14558 356 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 PARP6Q2NL67 630 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 ANKRD20A2Q5SQ80 823 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 MPP7Q5T2T1 576 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 C6orf118Q5T5N4 469 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 RNASEH2BQ5TBB1 312 aaKnown RBP7.39□□□□□ -1.23
CCNB3-206ENST00000487204 ANKRD20A1Q5TYW2 823 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 ANKRD20A3Q5VUR7 823 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 AFMIDQ63HM1 303 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 RAP1GAP2Q684P5 730 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 FBXL22Q6P050 247 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 RHBDF2Q6PJF5 856 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 ZDHHC24Q6UX98 284 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 LRIG3Q6UXM1 1119 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 HTR3DQ70Z44 454 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 GAREM2Q75VX8 874 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 TMC3Q7Z5M5 1100 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 TMEM150AQ86TG1 271 aa7.39□□□□□ -1.23
CCNB3-206ENST00000487204 SETD3Q86TU7 594 aaPredicted RBP7.39□□□□□ -1.23
CCNB3-206ENST00000487204 NLRP14Q86W24 1093 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms