RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 VPS4AQ9UN37 437 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 RRP7AQ9Y3A4 280 aaKnown RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 C3orf70A6NLC5 250 aaPredicted RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 E5RJQ4 531 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 SOCS2O14508 198 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 SEPT4O43236 478 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 HNRNPRO43390 633 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 EXOC3O60645 756 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 BCAR3O75815 825 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 HEXIM1O94992 359 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 ALDOAP04075 364 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 CYP3A4P08684 503 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 CYP21A2P08686 494 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 CNPP09543 421 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 APEHP13798 732 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 PLCD1P51178 756 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 TAS2R50P59544 299 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 TLE2Q04725 743 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 UBE3AQ05086 875 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 TBX2Q13207 712 aaPredicted RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 PDCLQ13371 301 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 DCTN1Q14203 1278 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 ANKRD1Q15327 319 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 CTXN3Q4LDR2 81 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 WDR93Q6P2C0 686 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 BCDIN3DQ7Z5W3 292 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 TMTC1Q8IUR5 882 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 FSIP1Q8NA03 581 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 PNLDC1Q8NA58 520 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 TEX19Q8NA77 164 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 NAXEQ8NCW5 288 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 MAFAQ8NHW3 353 aaPredicted RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 KTI12Q96EK9 354 aaPredicted RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 DAZAP1Q96EP5 407 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 TRMT61AQ96FX7 289 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 MAELQ96JY0 434 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 PPM1MQ96MI6 270 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 PIGSQ96S52 555 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 ELOVL1Q9BW60 279 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 RNF26Q9BY78 433 aaPredicted RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 WASH6PQ9NQA3 447 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 GAR1Q9NY12 217 aaKnown RBP3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 GGA3Q9NZ52 723 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 SLC13A4Q9UKG4 626 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 SLC12A4Q9UP95 1085 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 CRYL1Q9Y2S2 319 aa3.96□□□□□ -1.78
SNRNP27-204ENST00000487029 AGAP5A6NIR3 686 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 TTC34A8MYJ7 566 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 EYA2O00167 538 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 HOXC11O43248 304 aaPredicted RBP3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 MT-CO3P00414 261 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 XBP1P17861 261 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 PCP4P48539 62 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 RCAN1P53805 252 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 FOXL2P58012 376 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 NANOS2P60321 138 aaKnown RBP3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 WDR5P61964 334 aaKnown RBP3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 VAMP2P63027 116 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 HOXA4Q00056 320 aaPredicted RBP3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 CHRNDQ07001 517 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 TRPC3Q13507 836 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 INTS11Q5TA45 600 aaKnown RBP3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 MAP3K21Q5TCX8 1036 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 TRIM72Q6ZMU5 477 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 SYNE3Q6ZMZ3 975 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 BBS12Q6ZW61 710 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 PTGR2Q8N8N7 351 aaPredicted RBP3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 USP38Q8NB14 1042 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 NSMCE1Q8WV22 266 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 AKAP1Q92667 903 aaKnown RBP eCLIP3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 KAZALD1Q96I82 304 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 VCPIP1Q96JH7 1222 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 HS6ST2Q96MM7 605 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 ASIC5Q9NY37 505 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 SEMA5BQ9P283 1151 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 IFT80Q9P2H3 777 aaPredicted RBP3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 KLHL13Q9P2N7 655 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 DNAJC16Q9Y2G8 782 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 PCDHA10Q9Y5I2 948 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 SPATA31A1Q5TZJ5 1347 aa3.95□□□□□ -1.78
SNRNP27-204ENST00000487029 CYP3A7-CYP3A51PA0A087WV96 503 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 SAC3D1A6NKF1 404 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 STX16-NPEPL1H3BU86 382 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 H7C1Q1 480 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 CLIC1O00299 241 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 STX16O14662 325 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 FYB1O15117 783 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 TSPAN3O60637 253 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 ALPLP05186 524 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 SLC3A2P08195 630 aaKnown RBP3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 PEPDP12955 493 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 IGFBP2P18065 325 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 CYP3A7P24462 503 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 SLC8A1P32418 973 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 THBS3P49746 956 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 CCR5P51681 352 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 KCNB1Q14721 858 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 MFSD13AQ14CX5 517 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 RALBP1Q15311 655 aa3.94□□□□□ -1.78
SNRNP27-204ENST00000487029 CNGA3Q16281 694 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms