RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 A0A1W2PQH9 124 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 OR6C75A6NL08 312 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 TRIM49D1C9J1S8 452 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 KRT38O76015 456 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 CSH1P0DML2 217 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 CSH2P0DML3 217 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 MGAT1P26572 445 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 SERPINB9P50453 376 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 NEK3P51956 506 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 ATN1P54259 1190 aaPredicted RBP20.88■□□□□ 0.93
HPS3-206ENST00000486530 SESN2P58004 480 aaPredicted RBP20.88■□□□□ 0.93
HPS3-206ENST00000486530 CTXN3Q4LDR2 81 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 ZNF280DQ6N043 979 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 RWDD4Q6NW29 188 aaKnown RBP20.88■□□□□ 0.93
HPS3-206ENST00000486530 TRMT10BQ6PF06 316 aaKnown RBP20.88■□□□□ 0.93
HPS3-206ENST00000486530 SH2D5Q6ZV89 423 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 ANKRD33Q7Z3H0 272 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 MON1AQ86VX9 555 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 ARHGAP18Q8N392 663 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 RASSF4Q9H2L5 321 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 NMUR1Q9HB89 426 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 SFMBT1Q9UHJ3 866 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 ARL2BPQ9Y2Y0 163 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 PAGE1O75459 146 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 AP2A1O95782 977 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 ADRA1DP25100 572 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 TEX44Q53QW1 395 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 MANEALQ5VSG8 457 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 DEPDC1BQ8WUY9 529 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 SEPT8Q92599 483 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 TTC17Q96AE7 1141 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 CASD1Q96PB1 797 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 TRIM56Q9BRZ2 755 aaKnown RBP20.87■□□□□ 0.93
HPS3-206ENST00000486530 SIK2Q9H0K1 926 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 CATSPERBQ9H7T0 1116 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 STARD13Q9Y3M8 1113 aa20.87■□□□□ 0.93
HPS3-206ENST00000486530 MSI1O43347 362 aaKnown RBP20.86■□□□□ 0.93
HPS3-206ENST00000486530 SRGAP2BP0DMP2 458 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 PYGBP11216 843 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 CNTFP26441 200 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 PGFP49763 221 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 ACTN3Q08043 901 aaPredicted RBP20.86■□□□□ 0.93
HPS3-206ENST00000486530 SF3A3Q12874 501 aaKnown RBP eCLIP20.86■□□□□ 0.93
HPS3-206ENST00000486530 DNAJC3Q13217 504 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 NAB1Q13506 487 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 MRPL58Q14197 206 aaKnown RBP20.86■□□□□ 0.93
HPS3-206ENST00000486530 FAM171A1Q5VUB5 890 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 CGB2Q6NT52 195 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 MSANTD2Q6P1R3 559 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 TRPM8Q7Z2W7 1104 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 ARNTL2Q8WYA1 636 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 TBC1D31Q96DN5 1066 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 GORASP1Q9BQQ3 440 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 VPS11Q9H270 941 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 LRFN2Q9ULH4 789 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 ZBTB24O43167 697 aaPredicted RBP20.86■□□□□ 0.93
HPS3-206ENST00000486530 HOXA2O43364 376 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 NRG1Q02297 640 aaPredicted RBP20.86■□□□□ 0.93
HPS3-206ENST00000486530 ZBTB17Q13105 803 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 FAM47EQ6ZV65 393 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 MARK2Q7KZI7 788 aaKnown RBP20.86■□□□□ 0.93
HPS3-206ENST00000486530 CNPY4Q8N129 248 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 LZTR1Q8N653 840 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 CDKL2Q92772 493 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 DPF3Q92784 378 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 OXNAD1Q96HP4 312 aaPredicted RBP20.86■□□□□ 0.93
HPS3-206ENST00000486530 SLC17A7Q9P2U7 560 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 PRKAG3Q9UGI9 489 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 PHTF1Q9UMS5 762 aa20.86■□□□□ 0.93
HPS3-206ENST00000486530 EDF1O60869 148 aaKnown RBP20.85■□□□□ 0.93
HPS3-206ENST00000486530 FGFR3P22607 806 aa20.85■□□□□ 0.93
HPS3-206ENST00000486530 CRADDP78560 199 aa20.85■□□□□ 0.93
HPS3-206ENST00000486530 CRYMQ14894 314 aa20.85■□□□□ 0.93
HPS3-206ENST00000486530 DDR2Q16832 855 aa20.85■□□□□ 0.93
HPS3-206ENST00000486530 CEP57Q86XR8 500 aa20.85■□□□□ 0.93
HPS3-206ENST00000486530 CRIPAKQ8N1N5 446 aa20.85■□□□□ 0.93
HPS3-206ENST00000486530 MICALL1Q8N3F8 863 aa20.85■□□□□ 0.93
HPS3-206ENST00000486530 CELF6Q96J87 481 aaKnown RBP20.85■□□□□ 0.93
HPS3-206ENST00000486530 FCRL2Q96LA5 508 aaPredicted RBP20.85■□□□□ 0.93
HPS3-206ENST00000486530 TSGA13Q96PP4 275 aa20.85■□□□□ 0.93
HPS3-206ENST00000486530 SYBUQ9NX95 663 aa20.85■□□□□ 0.93
HPS3-206ENST00000486530 MKS1Q9NXB0 559 aa20.85■□□□□ 0.93
HPS3-206ENST00000486530 GREB1Q4ZG55 1949 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 KCNU1A8MYU2 1149 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 COPEO14579 308 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 UGT1A9O60656 530 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 ALDH2P05091 517 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 DHRS4L1P0CG22 281 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 CD68P34810 354 aaPredicted RBP20.84■□□□□ 0.93
HPS3-206ENST00000486530 CCNFP41002 786 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 GPR15P49685 360 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 NIPAL4Q0D2K0 466 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 KCTD11Q693B1 232 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 SPOCK2Q92563 424 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 ZNF75CPQ92670 426 aaPredicted RBP20.84■□□□□ 0.93
HPS3-206ENST00000486530 SCLYQ96I15 445 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 TEKT5Q96M29 485 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 AGAP3Q96P47 875 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 PGLYRP2Q96PD5 576 aa20.84■□□□□ 0.93
HPS3-206ENST00000486530 MRPL9Q9BYD2 267 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms