RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 CHCHD4Q8N4Q1 142 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 PRMT1Q99873 361 aaKnown RBP23.17■■□□□ 1.3
SREBF1-214ENST00000486311 FAM204AQ9H8W3 233 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 TM9SF3Q9HD45 589 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 TM7SF3Q9NS93 570 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 CHMP5Q9NZZ3 219 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 SLC12A6Q9UHW9 1150 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 PCOLCE2Q9UKZ9 415 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 PCDHGB2Q9Y5G2 931 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 ITIH6Q6UXX5 1313 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 TTC34A8MYJ7 566 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 F5H5T6 163 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 HSF2BPO75031 334 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 FSBPO95073 299 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 SLC2A3P11169 496 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 MTIF2P46199 727 aaKnown RBP23.16■■□□□ 1.3
SREBF1-214ENST00000486311 GRIA4P48058 902 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 SFSWAPQ12872 951 aaKnown RBP23.16■■□□□ 1.3
SREBF1-214ENST00000486311 TEAD4Q15561 434 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 KIF19Q2TAC6 998 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 EFHC1Q5JVL4 640 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 DBX2Q6ZNG2 339 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 GLRX5Q86SX6 157 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 APCDD1Q8J025 514 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 ORAI3Q9BRQ5 295 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 SIX2Q9NPC8 291 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 FBXL12Q9NXK8 326 aa23.16■■□□□ 1.3
SREBF1-214ENST00000486311 ZZEF1O43149 2961 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 EDDM13A0A1B0GTR0 161 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 FTH1P19P0C7X4 201 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 CCR1P32246 355 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 PTK2Q05397 1052 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 SLC12A1Q13621 1099 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 CST6Q15828 149 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 TTC39BQ5VTQ0 682 aaPredicted RBP23.15■■□□□ 1.3
SREBF1-214ENST00000486311 KIAA0895LQ68EN5 471 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 PASD1Q8IV76 773 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 GANCQ8TET4 914 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 ADAMTS14Q8WXS8 1223 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 NOX5Q96PH1 765 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 DDIT4Q9NX09 232 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 SERGEFQ9UGK8 458 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 SLCO3A1Q9UIG8 710 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 AJAP1Q9UKB5 411 aaPredicted RBP23.15■■□□□ 1.3
SREBF1-214ENST00000486311 ANKRD6Q9Y2G4 727 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 CEP83Q9Y592 693 aa23.15■■□□□ 1.3
SREBF1-214ENST00000486311 IGHV4-34P06331 123 aa23.14■■□□□ 1.29
SREBF1-214ENST00000486311 ABCB4P21439 1286 aa23.14■■□□□ 1.29
SREBF1-214ENST00000486311 RNF219Q5W0B1 726 aaPredicted RBP23.14■■□□□ 1.29
SREBF1-214ENST00000486311 OLFML1Q6UWY5 402 aa23.14■■□□□ 1.29
SREBF1-214ENST00000486311 C11orf57Q6ZUT1 292 aaPredicted RBP23.14■■□□□ 1.29
SREBF1-214ENST00000486311 MMAAQ8IVH4 418 aaKnown RBP23.14■■□□□ 1.29
SREBF1-214ENST00000486311 CCAR2Q8N163 923 aaKnown RBP23.14■■□□□ 1.29
SREBF1-214ENST00000486311 C1orf131Q8NDD1 294 aaKnown RBP23.14■■□□□ 1.29
SREBF1-214ENST00000486311 SETD7Q8WTS6 366 aaKnown RBP23.14■■□□□ 1.29
SREBF1-214ENST00000486311 DNAJC12Q9UKB3 198 aa23.14■■□□□ 1.29
SREBF1-214ENST00000486311 SNX11Q9Y5W9 270 aa23.14■■□□□ 1.29
SREBF1-214ENST00000486311 MID1O15344 667 aa23.13■■□□□ 1.29
SREBF1-214ENST00000486311 GALCP54803 685 aa23.13■■□□□ 1.29
SREBF1-214ENST00000486311 MAN2A1Q16706 1144 aa23.13■■□□□ 1.29
SREBF1-214ENST00000486311 TPD52L1Q16890 204 aaPredicted RBP23.13■■□□□ 1.29
SREBF1-214ENST00000486311 RABGAP1LQ5R372 815 aa23.13■■□□□ 1.29
SREBF1-214ENST00000486311 FAM183BPQ6ZVS7 135 aa23.13■■□□□ 1.29
SREBF1-214ENST00000486311 BAHD1Q8TBE0 780 aaPredicted RBP23.13■■□□□ 1.29
SREBF1-214ENST00000486311 RNF34Q969K3 372 aa23.13■■□□□ 1.29
SREBF1-214ENST00000486311 FAM129BQ96TA1 746 aa23.13■■□□□ 1.29
SREBF1-214ENST00000486311 ADAMTS1Q9UHI8 967 aa23.13■■□□□ 1.29
SREBF1-214ENST00000486311 FZD4Q9ULV1 537 aa23.13■■□□□ 1.29
SREBF1-214ENST00000486311 APOBEC2Q9Y235 224 aaKnown RBP23.13■■□□□ 1.29
SREBF1-214ENST00000486311 WDFY3Q8IZQ1 3526 aa23.13■■□□□ 1.29
SREBF1-214ENST00000486311 NUMA1Q14980 2115 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 SPEGQ15772 3267 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 SYNJ2BP-COX16A0A087WUM0 186 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 A0A1B0GVM2 712 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 A0A1W2PP55 124 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 TCAF2A6NFQ2 919 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 C10orf142B7Z368 130 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 FOXN3O00409 490 aaPredicted RBP23.12■■□□□ 1.29
SREBF1-214ENST00000486311 FLRT2O43155 660 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 GRAP2O75791 330 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 ERBB2P04626 1255 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 PDGFRAP16234 1089 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 SLC8A1P32418 973 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 CLCN1P35523 988 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 KRT9P35527 623 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 PLK1P53350 603 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 OXCT1P55809 520 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 SNX16P57768 344 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 SULT2A1Q06520 285 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 MTA1Q13330 715 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 OR6B2Q6IFH4 312 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 CXorf57Q6NSI4 855 aaKnown RBP23.12■■□□□ 1.29
SREBF1-214ENST00000486311 FBXL22Q6P050 247 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 SLC47A2Q86VL8 602 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 CIR1Q86X95 450 aaPredicted RBP23.12■■□□□ 1.29
SREBF1-214ENST00000486311 PTPRN2Q92932 1015 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 RPL10LQ96L21 214 aaKnown RBP23.12■■□□□ 1.29
SREBF1-214ENST00000486311 NEUROG2Q9H2A3 272 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 CLSTN2Q9H4D0 955 aa23.12■■□□□ 1.29
SREBF1-214ENST00000486311 COX16Q9P0S2 106 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms