RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 NUGGCQ68CJ6 796 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 RFWD3Q6PCD5 774 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 KLHDC10Q6PID8 442 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 VITQ6UXI7 678 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 TPGS1Q6ZTW0 290 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 BEND5Q7L4P6 421 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 STRADAQ7RTN6 431 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 CHSY1Q86X52 802 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 DDX42Q86XP3 938 aaKnown RBP eCLIP5.83□□□□□ -1.48
COPS3-208ENST00000486032 ADHFE1Q8IWW8 467 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 UNC45BQ8IWX7 931 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 BBS7Q8IWZ6 715 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 LGI2Q8N0V4 545 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 CCDC185Q8N715 623 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 HSPH1Q92598 858 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 PLD4Q96BZ4 506 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 LRRC3BQ96PB8 259 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 CNPY3Q9BT09 278 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 MAGEB5Q9BZ81 275 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 TSGA10Q9BZW7 698 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 DCLK3Q9C098 648 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 LINC00597Q9H2U6 94 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 EBF3Q9H4W6 596 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 DHX35Q9H5Z1 703 aaKnown RBP5.83□□□□□ -1.48
COPS3-208ENST00000486032 KIF9Q9HAQ2 790 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 KLHL11Q9NVR0 708 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.83□□□□□ -1.48
COPS3-208ENST00000486032 THG1LQ9NWX6 298 aaKnown RBP5.83□□□□□ -1.48
COPS3-208ENST00000486032 DUS2Q9NX74 493 aaKnown RBP5.83□□□□□ -1.48
COPS3-208ENST00000486032 PLK2Q9NYY3 685 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 STIM2Q9P246 746 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 EPS15L1Q9UBC2 864 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 MUTYHQ9UIF7 546 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 ZMYM5Q9UJ78 669 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 SALL4Q9UJQ4 1053 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 AGO1Q9UL18 857 aaKnown RBP5.83□□□□□ -1.48
COPS3-208ENST00000486032 TLR6Q9Y2C9 796 aa5.83□□□□□ -1.48
COPS3-208ENST00000486032 HBS1LQ9Y450 684 aaKnown RBP5.83□□□□□ -1.48
COPS3-208ENST00000486032 ZFP37Q9Y6Q3 630 aaPredicted RBP5.83□□□□□ -1.48
COPS3-208ENST00000486032 TRIOO75962 3097 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 NUP210Q8TEM1 1887 aaPredicted RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 ELOA3CA0A087WX78 387 aaPredicted RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 E2F8A0AVK6 867 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ELOA3DA6NLF2 546 aaPredicted RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 USP27XA6NNY8 438 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 LOC730098B7Z3J9 87 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 F5H5T6 163 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PJA2O43164 708 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 NARSO43776 548 aaKnown RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 CREB3O43889 395 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 LRCH4O75427 683 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PALMO75781 387 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PROSCO94903 275 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 FTCDO95954 541 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PDGFBP01127 241 aaPredicted RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 IGLV3-25P01717 112 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 KLKB1P03952 638 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ARSAP15289 507 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 TCF4P15884 667 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PFKLP17858 780 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PSMC3P17980 439 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 TACR2P21452 398 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 DEKP35659 375 aaKnown RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 ARHGAP25P42331 645 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PTPN9P43378 593 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 CXCR3P49682 368 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 KPNA1P52294 538 aaPredicted RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 PCBP4P57723 403 aaKnown RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 TAS2R40P59535 323 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 NRG1Q02297 640 aaPredicted RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 TNK2Q07912 1038 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 USP4Q13107 963 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 HTR4Q13639 388 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 KRT81Q14533 505 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 LLGL1Q15334 1064 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 IFI16Q16666 785 aaKnown RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 ELOA3BQ3SY89 546 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ATP13A4Q4VNC1 1196 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PPP6R3Q5H9R7 873 aaPredicted RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 BRMS1LQ5PSV4 323 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 KRTAP5-3Q6L8H2 238 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 RWDD4Q6NW29 188 aaKnown RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 ARCQ7LC44 396 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 SLFN11Q7Z7L1 901 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 C14orf80Q86SX3 495 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 CIR1Q86X95 450 aaPredicted RBP5.82□□□□□ -1.48
COPS3-208ENST00000486032 MFSD6LQ8IWD5 586 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ZDHHC14Q8IZN3 488 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 CFAP52Q8N1V2 620 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 PYROXD2Q8N2H3 581 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 SLC44A3Q8N4M1 653 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ZNF276Q8N554 614 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ARFGAP1Q8N6T3 406 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 NAT16Q8N8M0 369 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 ELOA3Q8NG57 546 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 TPCN2Q8NHX9 752 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 KIAA1524Q8TCG1 905 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 CSGALNACT1Q8TDX6 532 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 DDI1Q8WTU0 396 aa5.82□□□□□ -1.48
COPS3-208ENST00000486032 DEPDC1BQ8WUY9 529 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms