RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 DHX35Q9H5Z1 703 aaKnown RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 HAUS2Q9NVX0 235 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 DDX56Q9NY93 547 aaKnown RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 RCOR3Q9P2K3 495 aaPredicted RBP8.52□□□□□ -1.05
SF3A1-208ENST00000485618 PCSK1NQ9UHG2 260 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 FBXO10Q9UK96 956 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 FZD10Q9ULW2 581 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 AP4E1Q9UPM8 1137 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 STARD13Q9Y3M8 1113 aa8.52□□□□□ -1.05
SF3A1-208ENST00000485618 FAM186AA6NE01 2351 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 PTPRZ1P23471 2315 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 IGLV3-10A0A075B6K4 115 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 MED19A0JLT2 244 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 OTOL1A6NHN0 477 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 TMEM110-MUSTN1A8MSY1 372 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 EEF2KO00418 725 aaKnown RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 CREB3O43889 395 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 LRCH4O75427 683 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 ALDH1A2O94788 518 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 ASLP04424 464 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 RHOCP08134 193 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 CHRNB1P11230 501 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 PABPC1P11940 636 aaKnown RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 TFE3P19532 575 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 CD72P21854 359 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 HOXD9P28356 352 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 EPHB2P29323 1055 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 SLC6A4P31645 630 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 OPRD1P41143 372 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 MAPKAPK2P49137 400 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 CCR3P51677 355 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 NRLP54845 237 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 GEMIN4P57678 1058 aaKnown RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 TPI1P60174 286 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 RPS24P62847 133 aaKnown RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 SLC20A2Q08357 652 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 SFSWAPQ12872 951 aaKnown RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 STARD3Q14849 445 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 PPP6R3Q5H9R7 873 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 EOGTQ5NDL2 527 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 SH3PXD2AQ5TCZ1 1133 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 NADSYN1Q6IA69 706 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 RETSATQ6NUM9 610 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 RAD9BQ6WBX8 426 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 MAMSTRQ6ZN01 415 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 DAAM2Q86T65 1068 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 DNAAF5Q86Y56 855 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 RHOT1Q8IXI2 618 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 CCAR2Q8N163 923 aaKnown RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 CFAP52Q8N1V2 620 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 SPEM1Q8N4L4 309 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 LZTR1Q8N653 840 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 TERB1Q8NA31 727 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 OLIG1Q8TAK6 271 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 RUBCNQ92622 972 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 ARHGEF26Q96DR7 871 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 CHFRQ96EP1 664 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 ALS2CR12Q96Q35 445 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 C2orf49Q9BVC5 232 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 PACSIN1Q9BY11 444 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 CIPCQ9C0C6 399 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 MUC3BQ9H195 1237 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 SPATA6Q9NWH7 488 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-208ENST00000485618 ELOVL2Q9NXB9 296 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 PLK2Q9NYY3 685 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 DLGAP2Q9P1A6 1054 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 GGA2Q9UJY4 613 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 BAHCC1Q9P281 2608 aa8.51□□□□□ -1.05
SF3A1-208ENST00000485618 COL4A3Q01955 1670 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 KMT2BQ9UMN6 2715 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 VPS13AQ96RL7 3174 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 CXorf51AA0A1B0GTR3 108 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 ILVBLA1L0T0 632 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 ZSCAN5CA6NGD5 496 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 CHURC1-FNTBB4DL54 471 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 GFRA2O00451 464 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 PJA2O43164 708 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 LAMTOR5O43504 91 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 SYNCRIPO60506 623 aaKnown RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 LRIG2O94898 1065 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 CISD3P0C7P0 127 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 ZFXP17010 805 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 TARSP26639 723 aaKnown RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 SERPINB6P35237 376 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 CXCL12P48061 93 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 SLC6A11P48066 632 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 PLK1P53350 603 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 ATXN1P54253 815 aaKnown RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 YBEYP58557 167 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 ECT2LQ008S8 904 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 OGDHQ02218 1023 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 KDSRQ06136 332 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 CCINQ13939 588 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 OTUD1Q5VV17 481 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 FSTL4Q6MZW2 842 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 C11orf63Q6NUN7 778 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 TXNDC11Q6PKC3 985 aa8.5□□□□□ -1.05
SF3A1-208ENST00000485618 BZW1Q7L1Q6 419 aaKnown RBP8.5□□□□□ -1.05
SF3A1-208ENST00000485618 LRRC49Q8IUZ0 686 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms