RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 TAF5Q15542 800 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 GJB7Q6PEY0 223 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 NCEH1Q6PIU2 408 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 ADAT2Q7Z6V5 191 aaKnown RBP19.9■□□□□ 0.78
COL27A1-205ENST00000485397 TMEM110Q86TL2 294 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 KDM1BQ8NB78 822 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 STK32AQ8WU08 396 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 IGSF8Q969P0 613 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 EBF2Q9HAK2 575 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 TJP2Q9UDY2 1190 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 SCML1Q9UN30 329 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 PKD1L2Q7Z442 2459 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 TARSL2A2RTX5 802 aaKnown RBP19.89■□□□□ 0.77
COL27A1-205ENST00000485397 THAP12O43422 761 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 CACNA1GO43497 2377 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 MED7O43513 233 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 MOCS3O95396 460 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 IGLV3-25P01717 112 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 SRPRAP08240 638 aaKnown RBP19.89■□□□□ 0.77
COL27A1-205ENST00000485397 HOXB3P14651 431 aaPredicted RBP19.89■□□□□ 0.77
COL27A1-205ENST00000485397 GNA15P30679 374 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 YWHAZP63104 245 aaKnown RBP19.89■□□□□ 0.77
COL27A1-205ENST00000485397 IL9RQ01113 521 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 ARID5BQ14865 1188 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 MARCH9Q86YJ5 346 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 RPL10LQ96L21 214 aaKnown RBP19.89■□□□□ 0.77
COL27A1-205ENST00000485397 SLC6A18Q96N87 628 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 FAM129BQ96TA1 746 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 CRACR2AQ9BSW2 395 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 POPDC2Q9HBU9 364 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 LHX6Q9UPM6 363 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 CEP83Q9Y592 693 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 GTF3C3Q9Y5Q9 886 aa19.89■□□□□ 0.77
COL27A1-205ENST00000485397 TMEM131Q92545 1883 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 ITIH6Q6UXX5 1313 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 EDDM13A0A1B0GTR0 161 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 A0A1W2PPC4 97 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 RNASEH2AO75792 299 aaKnown RBP19.88■□□□□ 0.77
COL27A1-205ENST00000485397 DKK1O94907 266 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 SLC8A1P32418 973 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 PSMD8P48556 350 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 STK19P49842 368 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-205ENST00000485397 CCT8P50990 548 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 RACK1P63244 317 aaKnown RBP19.88■□□□□ 0.77
COL27A1-205ENST00000485397 ECT2LQ008S8 904 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 MEA1Q16626 185 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 PRAMEF14Q5SWL7 426 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 LRSAM1Q6UWE0 723 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 TMPRSS7Q7RTY8 843 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 CIR1Q86X95 450 aaPredicted RBP19.88■□□□□ 0.77
COL27A1-205ENST00000485397 STK40Q8N2I9 435 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 BTN2A3PQ96KV6 586 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 MED15Q96RN5 788 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 OMDQ99983 421 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 TRIM62Q9BVG3 475 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 THAP9Q9H5L6 903 aa19.88■□□□□ 0.77
COL27A1-205ENST00000485397 CCDC86Q9H6F5 360 aaKnown RBP19.88■□□□□ 0.77
COL27A1-205ENST00000485397 BECN2A8MW95 431 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 WNT1P04628 370 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 APBA1Q02410 837 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 SFSWAPQ12872 951 aaKnown RBP19.87■□□□□ 0.77
COL27A1-205ENST00000485397 PDCLQ13371 301 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 EIF4EBP2Q13542 120 aaPredicted RBP19.87■□□□□ 0.77
COL27A1-205ENST00000485397 KCNJ12Q14500 433 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 ARHGAP44Q17R89 818 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 RNF219Q5W0B1 726 aaPredicted RBP19.87■□□□□ 0.77
COL27A1-205ENST00000485397 AADATQ8N5Z0 425 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 ATP6V0D2Q8N8Y2 350 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 MDM1Q8TC05 714 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 PTPRN2Q92932 1015 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 ACE2Q9BYF1 805 aaPredicted RBP19.87■□□□□ 0.77
COL27A1-205ENST00000485397 ADAMTS1Q9UHI8 967 aa19.87■□□□□ 0.77
COL27A1-205ENST00000485397 ZFYVE26Q68DK2 2539 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 ZZEF1O43149 2961 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 SYNJ2BP-COX16A0A087WUM0 186 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 LRRC72A6NJI9 287 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 KCNU1A8MYU2 1149 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 F5H5T6 163 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 WNT9AO14904 365 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 VILLO15195 856 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 PCDHGA12O60330 932 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 PDGFRAP16234 1089 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 SLC9A1P19634 815 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 MZF1P28698 734 aaPredicted RBP19.86■□□□□ 0.77
COL27A1-205ENST00000485397 USP8P40818 1118 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 GRK6P43250 576 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 C21orf59P57076 290 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 CCDC157Q569K6 752 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 ENOSF1Q7L5Y1 443 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 CREBRFQ8IUR6 639 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 DEFB106AQ8N104 65 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 WDTC1Q8N5D0 677 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 OR2T34Q8NGX1 318 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 PRMT1Q99873 361 aaKnown RBP19.86■□□□□ 0.77
COL27A1-205ENST00000485397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.86■□□□□ 0.77
COL27A1-205ENST00000485397 COX16Q9P0S2 106 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 PTPRBP23467 1997 aa19.86■□□□□ 0.77
COL27A1-205ENST00000485397 A0A1B0GTQ1 180 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 C10orf142B7Z368 130 aa19.85■□□□□ 0.77
COL27A1-205ENST00000485397 TNFSF14O43557 240 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms