RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 EIF3CLB5ME19 914 aaKnown RBP16.37■□□□□ 0.21
UPF3A-208ENST00000484246 E9PAM4 449 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 H0Y626 953 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 ATP5BP06576 529 aaKnown RBP16.37■□□□□ 0.21
UPF3A-208ENST00000484246 DLDP09622 509 aaKnown RBP16.37■□□□□ 0.21
UPF3A-208ENST00000484246 HOXB2P14652 356 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 PSMA2P25787 234 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 CDC25BP30305 580 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 HOXC13P31276 330 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 GGCXP38435 758 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 IRAK1P51617 712 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 GFPT1Q06210 699 aaPredicted RBP16.37■□□□□ 0.21
UPF3A-208ENST00000484246 DMWDQ09019 674 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 PLEKHG6Q3KR16 790 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 PITRM1Q5JRX3 1037 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 SETD3Q86TU7 594 aaPredicted RBP16.37■□□□□ 0.21
UPF3A-208ENST00000484246 CIR1Q86X95 450 aaPredicted RBP16.37■□□□□ 0.21
UPF3A-208ENST00000484246 CCDC185Q8N715 623 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 NIPA2Q8N8Q9 360 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 HHIPQ96QV1 700 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 ACOX2Q99424 681 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 EIF3CQ99613 913 aaKnown RBP16.37■□□□□ 0.21
UPF3A-208ENST00000484246 CHP1Q99653 195 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 TRIM7Q9C029 511 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 CIPCQ9C0C6 399 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 SIK2Q9H0K1 926 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 TMEM245Q9H330 911 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 DEF6Q9H4E7 631 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 TMPRSS4Q9NRS4 437 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 POLR3BQ9NW08 1133 aaPredicted RBP16.37■□□□□ 0.21
UPF3A-208ENST00000484246 OR51B4Q9Y5P0 310 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 STON1Q9Y6Q2 735 aa16.37■□□□□ 0.21
UPF3A-208ENST00000484246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.36■□□□□ 0.21
UPF3A-208ENST00000484246 AKR1B10O60218 316 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 ALDH1A2O94788 518 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 L1CAMP32004 1257 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 HTR7P34969 479 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 PCK1P35558 622 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 CSKP41240 450 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 IL12RB1P42701 662 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 FNTBP49356 437 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 GALCP54803 685 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 SEMA3BQ13214 749 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 ZNF177Q13360 481 aaPredicted RBP16.36■□□□□ 0.21
UPF3A-208ENST00000484246 ZNF234Q14588 700 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 PTPRNQ16849 979 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 ALFQ53S48 1182 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 EFHC2Q5JST6 749 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 SDE2Q6IQ49 451 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 ZNF783Q6ZMS7 281 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 SLFN11Q7Z7L1 901 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 PSTKQ8IV42 348 aaKnown RBP16.36■□□□□ 0.21
UPF3A-208ENST00000484246 ARFGAP1Q8N6T3 406 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 ATRIPQ8WXE1 791 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 ALG14Q96F25 216 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 CCDC42Q96M95 316 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 PANX2Q96RD6 677 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 PPP1R9BQ96SB3 815 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 ZYG11BQ9C0D3 744 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 EPC1Q9H2F5 836 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 NHEJ1Q9H9Q4 299 aaPredicted RBP16.36■□□□□ 0.21
UPF3A-208ENST00000484246 POLMQ9NP87 494 aaPredicted RBP16.36■□□□□ 0.21
UPF3A-208ENST00000484246 FAM86C1Q9NVL1 165 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 CACNA2D2Q9NY47 1150 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 UVRAGQ9P2Y5 699 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 OR12D3Q9UGF7 316 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 SNX10Q9Y5X0 201 aa16.36■□□□□ 0.21
UPF3A-208ENST00000484246 CACNA1IQ9P0X4 2223 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 AXIN1O15169 862 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 CNTN5O94779 1100 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 MOCS3O95396 460 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 H2AFZP0C0S5 128 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 TMEM253P0C7T8 217 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 POLR2EP19388 210 aaKnown RBP16.35■□□□□ 0.21
UPF3A-208ENST00000484246 SULT2A1Q06520 285 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 H2AFVQ71UI9 128 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 MDGA1Q8NFP4 955 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 SORCS1Q8WY21 1168 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 ARHGEF26Q96DR7 871 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 MYO19Q96H55 970 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 ZDHHC4Q9NPG8 344 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 MYO1AQ9UBC5 1043 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 LCMT1Q9UIC8 334 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 FZD10Q9ULW2 581 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 R4GN57 208 aa16.35■□□□□ 0.21
UPF3A-208ENST00000484246 MUC22E2RYF6 1773 aaPredicted RBP16.35■□□□□ 0.21
UPF3A-208ENST00000484246 MYOFQ9NZM1 2061 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 CXorf51AA0A1B0GTR3 108 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 LRCH4O75427 683 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 RNF8O76064 485 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 LRIG2O94898 1065 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 SRPRAP08240 638 aaKnown RBP16.34■□□□□ 0.21
UPF3A-208ENST00000484246 RHOQP17081 205 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 PRKCHP24723 683 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 MRE11P49959 708 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 PIGHQ14442 188 aaPredicted RBP16.34■□□□□ 0.21
UPF3A-208ENST00000484246 STARD3Q14849 445 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 C6orf118Q5T5N4 469 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 SERPINA13PQ6UXR4 307 aa16.34■□□□□ 0.21
UPF3A-208ENST00000484246 CYP4V2Q6ZWL3 525 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms