RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 SHKBP1Q8TBC3 707 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 ADAMTS16Q8TE57 1224 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 TMIGD2Q96BF3 282 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 TRMT13Q9NUP7 481 aaKnown RBP13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 SEPT3Q9UH03 358 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 A0A087WXM4 84 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 MYOCOSA0A1B0GUC4 107 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 CFAP99D6REC4 459 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 MEIS2O14770 477 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 UGT1A9O60656 530 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 INHBAP08476 426 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 ALOX5P09917 674 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 UGT1A6P19224 532 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 UGT1A1P22309 533 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 UGT1A4P22310 534 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 UGT1A3P35503 534 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 UGT1A5P35504 534 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 CLK2P49760 499 aaKnown RBP13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 YWHAGP61981 247 aaKnown RBP eCLIP13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 PDE1CQ14123 709 aaPredicted RBP13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 DGKDQ16760 1214 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 TCHHL1Q5QJ38 904 aaPredicted RBP13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 HP1BP3Q5SSJ5 553 aaPredicted RBP13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 CELF3Q5SZQ8 465 aaKnown RBP13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 XRRA1Q6P2D8 792 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 CARM1Q86X55 608 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 ZNF354CQ86Y25 554 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 SLC9A9Q8IVB4 645 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 SLC44A1Q8WWI5 657 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 SERAC1Q96JX3 654 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 FERMT1Q9BQL6 677 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 HEMGNQ9BXL5 484 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 ARMC7Q9H6L4 198 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 PSTPIP2Q9H939 334 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 UGT1A7Q9HAW7 530 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 UGT1A10Q9HAW8 530 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 UGT1A8Q9HAW9 530 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 CLK4Q9HAZ1 481 aaKnown RBP13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 THAP1Q9NVV9 213 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 PLLPQ9Y342 182 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 PCDHB2Q9Y5E7 798 aa13.47□□□□□ -0.25
CNKSR3-204ENST00000479339 A0A0B4J269 797 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 TRIM64BA6NI03 449 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 TNFRSF10AO00220 468 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 TRIM49P0CI25 452 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 TRIM49CP0CI26 452 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 VDRP11473 427 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 RPA1P27694 616 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 ICAM3P32942 547 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 MRPS9P82933 396 aaKnown RBP13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 CDKL1Q00532 357 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 TUBB3Q13509 450 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 CHI3L2Q15782 390 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 POTEGQ6S5H5 508 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 ANKMY2Q8IV38 441 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 PALM2Q8IXS6 379 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 PPIL6Q8IXY8 311 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 HSPH1Q92598 858 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 RTKNQ9BST9 563 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 ADAM33Q9BZ11 813 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 TMEM9Q9P0T7 183 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 VPS28Q9UK41 221 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 TIMM22Q9Y584 194 aa13.46□□□□□ -0.25
CNKSR3-204ENST00000479339 ARHGEF37A1IGU5 675 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 XPO1O14980 1071 aaKnown RBP13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 PMM2O15305 246 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 PROSCO94903 275 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 SSTR1P30872 391 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 SP2Q02086 613 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 NR1D2Q14995 579 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 TRIM16LQ309B1 348 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 EPC2Q52LR7 807 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 FAM47CQ5HY64 1035 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 TTC39BQ5VTQ0 682 aaPredicted RBP13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 KRT80Q6KB66 452 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 USP17L6PQ6QN14 398 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 NUDCD3Q8IVD9 361 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 ARHGEF19Q8IW93 802 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 PDPRQ8NCN5 879 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 HERVK_113Q902F9 699 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 ZNF597Q96LX8 424 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 ZNF641Q96N77 438 aaPredicted RBP13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 IMPG2Q9BZV3 1241 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 CYP4F11Q9HBI6 524 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 DNAJC28Q9NX36 388 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 SEL1LQ9UBV2 794 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 EBF1Q9UH73 591 aa13.46□□□□□ -0.26
CNKSR3-204ENST00000479339 TMEM265A0A087WTH1 108 aa13.45□□□□□ -0.26
CNKSR3-204ENST00000479339 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.45□□□□□ -0.26
CNKSR3-204ENST00000479339 PRSS51A0A1B0GVH4 220 aa13.45□□□□□ -0.26
CNKSR3-204ENST00000479339 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.45□□□□□ -0.26
CNKSR3-204ENST00000479339 FAM170AA1A519 330 aa13.45□□□□□ -0.26
CNKSR3-204ENST00000479339 HAS3O00219 553 aa13.45□□□□□ -0.26
CNKSR3-204ENST00000479339 ITGAVP06756 1048 aa13.45□□□□□ -0.26
CNKSR3-204ENST00000479339 ACRP10323 421 aa13.45□□□□□ -0.26
CNKSR3-204ENST00000479339 UBA1P22314 1058 aaKnown RBP13.45□□□□□ -0.26
CNKSR3-204ENST00000479339 NDST2P52849 883 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms