RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ZBTB24O43167 697 aaPredicted RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 ATP9BO43861 1147 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 KIF1CO43896 1103 aaKnown RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 CTSHP09668 335 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 C6orf222P0C671 652 aaPredicted RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 VHLP40337 213 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 CLCNKBP51801 687 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 SNX16P57768 344 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 ADAM17P78536 824 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 ZBTB17Q13105 803 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 CBLBQ13191 982 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 DPYSQ14117 519 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 PCLAFQ15004 111 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 TSNAXIP1Q2TAA8 658 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 RALGPS1Q5JS13 557 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 RNF220Q5VTB9 566 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 STEAP4Q687X5 459 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 RIPOR1Q6ZS17 1223 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 ZNF467Q7Z7K2 595 aaPredicted RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 ZMIZ2Q8NF64 920 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 CFAP61Q8NHU2 1237 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 ATP2A3Q93084 1043 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 MFSD3Q96ES6 412 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 GAD1Q99259 594 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 SYT17Q9BSW7 474 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 CYP4F11Q9HBI6 524 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 DDX43Q9NXZ2 648 aaKnown RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 KLHL8Q9P2G9 620 aaPredicted RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 STOML1Q9UBI4 398 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 MORF4L1Q9UBU8 362 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 PACSIN3Q9UKS6 424 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 EME2A4GXA9 379 aaPredicted RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 DCLK1O15075 740 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 PLIN3O60664 434 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 DAB1O75553 588 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 NCAM1P13591 858 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 KCNE1P15382 129 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 PTPN3P26045 913 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 CD68P34810 354 aaPredicted RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 NOS2P35228 1153 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 ADRA1BP35368 520 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 ACADSBP45954 432 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 PSEN2P49810 448 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 IFRD2Q12894 506 aaPredicted RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 KRT72Q14CN4 511 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 SV2CQ496J9 727 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 LIMS2Q7Z4I7 341 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 GSTCDQ8NEC7 633 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 USP33Q8TEY7 942 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 WNT8BQ93098 351 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 NT5C3BQ969T7 300 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 CCDC124Q96CT7 223 aaKnown RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 MTBPQ96DY7 904 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 PCED1BQ96HM7 432 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 TNIP3Q96KP6 325 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 ZNF560Q96MR9 790 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 CCDC106Q9BWC9 280 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 WDR6Q9NNW5 1121 aaKnown RBP11.08□□□□□ -0.64
VPS52-217ENST00000478934 MAN1C1Q9NR34 630 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 SLC7A8Q9UHI5 535 aa11.08□□□□□ -0.64
VPS52-217ENST00000478934 LOC100653049A0A140TA62 436 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 MYADML2A6NDP7 307 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 A6NHS1 94 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 CASTOR2A6NHX0 329 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 AP1G2O75843 785 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 KRT34O76011 436 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 PDE5AO76074 875 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 UBTFL6P0CB48 400 aaPredicted RBP11.07□□□□□ -0.64
VPS52-217ENST00000478934 CYP2B6P20813 491 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 SAT1P21673 171 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 TYK2P29597 1187 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 CCR10P46092 362 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 SLC1A6P48664 564 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 SLC34A1Q06495 639 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 TUBB3Q13509 450 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 HSP90AA5PQ58FG0 334 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 SPDYAQ5MJ70 313 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 ARHGAP36Q6ZRI8 547 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 MARK2Q7KZI7 788 aaKnown RBP11.07□□□□□ -0.64
VPS52-217ENST00000478934 ULK2Q8IYT8 1036 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 PNPLA1Q8N8W4 532 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 HASPINQ8TF76 798 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 ZNF669Q96BR6 464 aaPredicted RBP11.07□□□□□ -0.64
VPS52-217ENST00000478934 SENP8Q96LD8 212 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 UNKQ9C0B0 810 aaKnown RBP11.07□□□□□ -0.64
VPS52-217ENST00000478934 CHRAC1Q9NRG0 131 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 ZNF487B1APH4 448 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 LUC7L3O95232 432 aaKnown RBP11.07□□□□□ -0.64
VPS52-217ENST00000478934 PGAM1P18669 254 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 FDFT1P37268 417 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 GLUD2P49448 558 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 EPHB1P54762 984 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 SARNPP82979 210 aaKnown RBP11.07□□□□□ -0.64
VPS52-217ENST00000478934 USP4Q13107 963 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 ITGA9Q13797 1035 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 EML3Q32P44 896 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 XKR4Q5GH76 650 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 NAPRTQ6XQN6 538 aa11.07□□□□□ -0.64
VPS52-217ENST00000478934 SCUBE1Q8IWY4 988 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms