RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PSMD8P48556 350 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 ADPRHP54922 357 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 UCNP55089 124 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 PCBP4P57723 403 aaKnown RBP17.81■□□□□ 0.44
VIM-204ENST00000478746 GOLGA7BQ2TAP0 167 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 PROX2Q3B8N5 592 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 ARHGAP40Q5TG30 622 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 NAPEPLDQ6IQ20 393 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 CCDC117Q8IWD4 279 aaPredicted RBP17.81■□□□□ 0.44
VIM-204ENST00000478746 SIX6OS1Q8N1H7 587 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 CARNMT1Q8N4J0 409 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 AADATQ8N5Z0 425 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 TATDN2Q93075 761 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 CPNE5Q9HCH3 593 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 SERTAD1Q9UHV2 236 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 TRAF3IP3Q9Y228 551 aa17.81■□□□□ 0.44
VIM-204ENST00000478746 LATO43561 262 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 SIGLEC6O43699 453 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 SRPRAP08240 638 aaKnown RBP17.8■□□□□ 0.44
VIM-204ENST00000478746 NR2F2P24468 414 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 ENPEPQ07075 957 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 BST2Q10589 180 aaKnown RBP17.8■□□□□ 0.44
VIM-204ENST00000478746 ZNF211Q13398 564 aaPredicted RBP17.8■□□□□ 0.44
VIM-204ENST00000478746 PKDCCQ504Y2 493 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 FAM133BQ5BKY9 247 aaKnown RBP17.8■□□□□ 0.44
VIM-204ENST00000478746 NUGGCQ68CJ6 796 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 KRT39Q6A163 491 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.8■□□□□ 0.44
VIM-204ENST00000478746 IQCHQ86VS3 1027 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 FAM186BQ8IYM0 893 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 STK40Q8N2I9 435 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 HJURPQ8NCD3 748 aaPredicted RBP17.8■□□□□ 0.44
VIM-204ENST00000478746 SEMA4DQ92854 862 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 AZIN2Q96A70 460 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 PAGE5Q96GU1 130 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
VIM-204ENST00000478746 DDX50Q9BQ39 737 aaKnown RBP17.8■□□□□ 0.44
VIM-204ENST00000478746 CLMPQ9H6B4 373 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 HESX1Q9UBX0 185 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 SLCO3A1Q9UIG8 710 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 TSPAN16Q9UKR8 245 aa17.8■□□□□ 0.44
VIM-204ENST00000478746 TYW5A2RUC4 315 aaKnown RBP17.79■□□□□ 0.44
VIM-204ENST00000478746 B8ZZF3 427 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 TRIM38O00635 465 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 SDC3O75056 442 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 MOCS3O95396 460 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 IL1BP01584 269 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 IGLV3-27P01718 113 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 GTF2H1P32780 548 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 CTSOP43234 321 aaPredicted RBP17.79■□□□□ 0.44
VIM-204ENST00000478746 PPP2CBP62714 309 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 PPP2CAP67775 309 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 DAB2P98082 770 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 KCNC4Q03721 635 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 OVGP1Q12889 678 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 STAT4Q14765 748 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 HS1BP3Q53T59 392 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 PITRM1Q5JRX3 1037 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 RESP18Q5W5W9 173 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 MSANTD2Q6P1R3 559 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 LSMEM2Q8N112 164 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 UBA3Q8TBC4 463 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 HIC2Q96JB3 615 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 CNGB3Q9NQW8 809 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 ARHGAP20Q9P2F6 1191 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 PCDHA7Q9UN72 937 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 CEP83Q9Y592 693 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 PCDHB1Q9Y5F3 818 aa17.79■□□□□ 0.44
VIM-204ENST00000478746 MPOP05164 745 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 LCP1P13796 627 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 MAT2AP31153 395 aaKnown RBP17.78■□□□□ 0.44
VIM-204ENST00000478746 PSMC2P35998 433 aaKnown RBP17.78■□□□□ 0.44
VIM-204ENST00000478746 ME1P48163 572 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 TBX4P57082 545 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 DAOAP59103 153 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 RPS24P62847 133 aaKnown RBP17.78■□□□□ 0.44
VIM-204ENST00000478746 ECT2LQ008S8 904 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 CDH18Q13634 790 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 LY6DQ14210 128 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 NFIL3Q16649 462 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 SGO2Q562F6 1265 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 FSCBQ5H9T9 825 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 RNF219Q5W0B1 726 aaPredicted RBP17.78■□□□□ 0.44
VIM-204ENST00000478746 MMS22LQ6ZRQ5 1243 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 SCML4Q8N228 414 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 FAM181AQ8N9Y4 354 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 FBXL13Q8NEE6 735 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 KCTD13Q8WZ19 329 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 PTPRN2Q92932 1015 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 RPL10LQ96L21 214 aaKnown RBP17.78■□□□□ 0.44
VIM-204ENST00000478746 SEMA4CQ9C0C4 833 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 KDM4CQ9H3R0 1056 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 RAB20Q9NX57 234 aa17.78■□□□□ 0.44
VIM-204ENST00000478746 ITIH6Q6UXX5 1313 aa17.77■□□□□ 0.44
VIM-204ENST00000478746 C6P13671 934 aa17.77■□□□□ 0.44
VIM-204ENST00000478746 RPL13P26373 211 aaKnown RBP17.77■□□□□ 0.44
VIM-204ENST00000478746 MZF1P28698 734 aaPredicted RBP17.77■□□□□ 0.44
VIM-204ENST00000478746 NUDT1P36639 197 aa17.77■□□□□ 0.44
VIM-204ENST00000478746 ADAM9Q13443 819 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms