RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 SYCP2LQ5T4T6 812 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 NADSYN1Q6IA69 706 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 OR6B2Q6IFH4 312 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 C19orf48Q6RUI8 117 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 CCNI2Q6ZMN8 369 aaPredicted RBP16.35■□□□□ 0.21
GARNL3-215ENST00000478702 METTL3Q86U44 580 aaKnown RBP16.35■□□□□ 0.21
GARNL3-215ENST00000478702 SLCO6A1Q86UG4 719 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 ZDHHC17Q8IUH5 632 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
GARNL3-215ENST00000478702 SLC20A1Q8WUM9 679 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 FOXJ1Q92949 421 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 TOE1Q96GM8 510 aaKnown RBP16.35■□□□□ 0.21
GARNL3-215ENST00000478702 PRICKLE1Q96MT3 831 aaPredicted RBP16.35■□□□□ 0.21
GARNL3-215ENST00000478702 SLC2A11Q9BYW1 496 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 MKRN2Q9H000 416 aaKnown RBP16.35■□□□□ 0.21
GARNL3-215ENST00000478702 PDCL3Q9H2J4 239 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 IL21RQ9HBE5 538 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 CLEC4EQ9ULY5 219 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 PCDHB9Q9Y5E1 797 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 SHROOM3Q8TF72 1996 aa16.35■□□□□ 0.21
GARNL3-215ENST00000478702 A0A1B0GTW7 788 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 TSPAN3O60637 253 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 GRAP2O75791 330 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 APOEP02649 317 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 GNSP15586 552 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 SCNN1AP37088 669 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 STAT1P42224 750 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 IL12RB1P42701 662 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 BNC1Q01954 994 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 SLC6A3Q01959 620 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 IQCB1Q15051 598 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 EIF4HQ15056 248 aaKnown RBP16.34■□□□□ 0.21
GARNL3-215ENST00000478702 GEN1Q17RS7 908 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 DCAF6Q58WW2 860 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 WDR45BQ5MNZ6 344 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 GLRX5Q86SX6 157 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 DEFB106AQ8N104 65 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 ZCCHC9Q8N567 271 aaKnown RBP16.34■□□□□ 0.21
GARNL3-215ENST00000478702 PCMTD1Q96MG8 357 aaPredicted RBP16.34■□□□□ 0.21
GARNL3-215ENST00000478702 PRDM16Q9HAZ2 1276 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 ITM2CQ9NQX7 267 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 THAP10Q9P2Z0 257 aaPredicted RBP16.34■□□□□ 0.21
GARNL3-215ENST00000478702 PCOLCE2Q9UKZ9 415 aa16.34■□□□□ 0.21
GARNL3-215ENST00000478702 DOCK4Q8N1I0 1966 aa16.33■□□□□ 0.21
GARNL3-215ENST00000478702 URB1O60287 2271 aaKnown RBP16.33■□□□□ 0.2
GARNL3-215ENST00000478702 MOCS2O96007 188 aaPredicted RBP16.33■□□□□ 0.2
GARNL3-215ENST00000478702 CDK17Q00537 523 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 FMO1Q01740 532 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 CDR2Q01850 454 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 MPP7Q5T2T1 576 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 PIK3R6Q5UE93 754 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 OTUD1Q5VV17 481 aaPredicted RBP16.33■□□□□ 0.2
GARNL3-215ENST00000478702 RFWD3Q6PCD5 774 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 XYLT1Q86Y38 959 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.33■□□□□ 0.2
GARNL3-215ENST00000478702 HJURPQ8NCD3 748 aaPredicted RBP16.33■□□□□ 0.2
GARNL3-215ENST00000478702 MSANTD4Q8NCY6 345 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 MDM1Q8TC05 714 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 TMA16Q96EY4 203 aaKnown RBP16.33■□□□□ 0.2
GARNL3-215ENST00000478702 GPR174Q9BXC1 333 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 ZDHHC5Q9C0B5 715 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 NUCKS1Q9H1E3 243 aaKnown RBP16.33■□□□□ 0.2
GARNL3-215ENST00000478702 DDIT4Q9NX09 232 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 TOR4AQ9NXH8 423 aa16.33■□□□□ 0.2
GARNL3-215ENST00000478702 GOLGA6L7A0A1B0GV03 622 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 MEI4A8MW99 385 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 CYP1A1P04798 512 aaPredicted RBP16.32■□□□□ 0.2
GARNL3-215ENST00000478702 CHRNB2P17787 502 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 HLA-FP30511 346 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 TPMTP51580 245 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 COPAP53621 1224 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 MYLKQ15746 1914 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 COL28A1Q2UY09 1125 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 SOWAHCQ53LP3 525 aaPredicted RBP16.32■□□□□ 0.2
GARNL3-215ENST00000478702 ZC3H12AQ5D1E8 599 aaKnown RBP16.32■□□□□ 0.2
GARNL3-215ENST00000478702 DCAF12L1Q5VU92 463 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 NAA35Q5VZE5 725 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 ERICH1Q86X53 443 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 CADM4Q8NFZ8 388 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 BAHD1Q8TBE0 780 aaPredicted RBP16.32■□□□□ 0.2
GARNL3-215ENST00000478702 WFDC5Q8TCV5 224 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 WFIKKN2Q8TEU8 576 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 C18orf8Q96DM3 657 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 MYEOVQ96EZ4 313 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 BTN2A3PQ96KV6 586 aa16.32■□□□□ 0.2
GARNL3-215ENST00000478702 DDX50Q9BQ39 737 aaKnown RBP16.32■□□□□ 0.2
GARNL3-215ENST00000478702 RTN4Q9NQC3 1192 aaKnown RBP16.32■□□□□ 0.2
GARNL3-215ENST00000478702 XPO7Q9UIA9 1087 aaKnown RBP16.32■□□□□ 0.2
GARNL3-215ENST00000478702 TYW5A2RUC4 315 aaKnown RBP16.31■□□□□ 0.2
GARNL3-215ENST00000478702 METTL12A8MUP2 240 aa16.31■□□□□ 0.2
GARNL3-215ENST00000478702 NPC1O15118 1278 aa16.31■□□□□ 0.2
GARNL3-215ENST00000478702 TEX33O43247 280 aa16.31■□□□□ 0.2
GARNL3-215ENST00000478702 IGLV3-19P01714 112 aa16.31■□□□□ 0.2
GARNL3-215ENST00000478702 NOS2P35228 1153 aa16.31■□□□□ 0.2
GARNL3-215ENST00000478702 MATKP42679 507 aa16.31■□□□□ 0.2
GARNL3-215ENST00000478702 STARD3Q14849 445 aa16.31■□□□□ 0.2
GARNL3-215ENST00000478702 MS4A13Q5J8X5 152 aa16.31■□□□□ 0.2
GARNL3-215ENST00000478702 FAM102AQ5T9C2 384 aaPredicted RBP16.31■□□□□ 0.2
GARNL3-215ENST00000478702 TMEM215Q68D42 235 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms