RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-215ENST00000478531 SOWAHDA6NJG2 315 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 GOLGA6L6A8MZA4 724 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 CHURC1-FNTBB4DL54 471 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 WASH3PC4AMC7 463 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 FAM72CH0Y354 149 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 CREB3O43889 395 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 PRPSAP2O60256 369 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 CLDN11O75508 207 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 H2AFZP0C0S5 128 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 HOXB2P14652 356 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 POLR2EP19388 210 aaKnown RBP7.1□□□□□ -1.27
BRCA1-215ENST00000478531 GJC1P36383 396 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 CSKP41240 450 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 SSR1P43307 286 aaKnown RBP7.1□□□□□ -1.27
BRCA1-215ENST00000478531 ZNF177Q13360 481 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-215ENST00000478531 EIF4HQ15056 248 aaKnown RBP7.1□□□□□ -1.27
BRCA1-215ENST00000478531 SMTNL2Q2TAL5 461 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 PITRM1Q5JRX3 1037 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 FAM72AQ5TYM5 149 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 MBLAC2Q68D91 279 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 RNF43Q68DV7 783 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 ANO7Q6IWH7 933 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 FAM72DQ6L9T8 149 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 SERPINA13PQ6UXR4 307 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 H2AFVQ71UI9 128 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 SYT13Q7L8C5 426 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 FAM72BQ86X60 149 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 CACUL1Q86Y37 369 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 ZNF366Q8N895 744 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 ZNF557Q8N988 423 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-215ENST00000478531 TSTD1Q8NFU3 115 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 WFIKKN2Q8TEU8 576 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 HMGB4Q8WW32 186 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 PANX2Q96RD6 677 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 PEBP4Q96S96 227 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 ZMYND15Q9H091 742 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 MUC3BQ9H195 1237 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 KCNH6Q9H252 994 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 ELOVL2Q9NXB9 296 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 FBXO4Q9UKT5 387 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 R4GN57 208 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 SHROOM3Q8TF72 1996 aa7.1□□□□□ -1.27
BRCA1-215ENST00000478531 TCRBV21S2A2A0A5A6 115 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 TMEM110-MUSTN1A8MSY1 372 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 K7ESF4 209 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 MYO1FO00160 1098 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 LRCH4O75427 683 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 LRIG2O94898 1065 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 MOCS3O95396 460 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 RHOCP08134 193 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 CHRM1P11229 460 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 HLA-EP13747 358 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 HNRNPLP14866 589 aaKnown RBP eCLIP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 TCF4P15884 667 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 MZF1P28698 734 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 MIPP30301 263 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 OR1E1P30953 314 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 NTSR1P30989 418 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 IL12RB1P42701 662 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 CTSOP43234 321 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 FNTBP49356 437 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 CDH4P55283 916 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 SCAPQ12770 1279 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ZNF234Q14588 700 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 CRY1Q16526 586 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 PLEKHG6Q3KR16 790 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 EOGTQ5NDL2 527 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 RNF219Q5W0B1 726 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 SDE2Q6IQ49 451 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 CXorf57Q6NSI4 855 aaKnown RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 TMEM92Q6UXU6 159 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ADIPOR2Q86V24 386 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ZNF683Q8IZ20 524 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 APCDD1Q8J025 514 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ARFGAP1Q8N6T3 406 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 FNIP1Q8TF40 1166 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 NTAN1Q96AB6 310 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 TBC1D31Q96DN5 1066 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 C1orf74Q96LT6 269 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 SNRNP25Q9BV90 132 aaKnown RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 TPSD1Q9BZJ3 242 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ZYG11BQ9C0D3 744 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 DHX35Q9H5Z1 703 aaKnown RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ZWILCHQ9H900 591 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 OSGEPQ9NPF4 335 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 KIAA1522Q9P206 1035 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 VPS28Q9UK41 221 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 INTS6Q9UL03 887 aaKnown RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 FZD10Q9ULW2 581 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 PLA2G4CQ9UP65 541 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 AP4E1Q9UPM8 1137 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 STARD13Q9Y3M8 1113 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 GVINP1Q7Z2Y8 2422 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 CEP192Q8TEP8 1941 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 GON4LQ3T8J9 2241 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 FAM186AA6NE01 2351 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 THADAQ6YHU6 1953 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 IGLV3-10A0A075B6K4 115 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms