RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PRUNE1Q86TP1 453 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 RFX6Q8HWS3 928 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ANKRD13AQ8IZ07 590 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ZBED8Q8IZ13 594 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 NAT8LQ8N9F0 302 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 GLIS1Q8NBF1 620 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 SLC4A11Q8NBS3 891 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 CMASQ8NFW8 434 aaPredicted RBP5.13□□□□□ -1.59
SF3B6-202ENST00000478050 JOSD2Q8TAC2 188 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 GDAP1Q8TB36 358 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ACTL9Q8TC94 416 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 DENND1AQ8TEH3 1009 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 SH3TC2Q8TF17 1288 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 PYROXD1Q8WU10 500 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 AFG1LQ8WV93 481 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 MYLIPQ8WY64 445 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 USP6NLQ92738 828 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 HAUS1Q96CS2 278 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 TMEM176AQ96HP8 235 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 KIRREL1Q96J84 757 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 FANCD2OSQ96PS1 177 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ADPGKQ9BRR6 497 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 TACO1Q9BSH4 297 aaKnown RBP5.13□□□□□ -1.59
SF3B6-202ENST00000478050 CNPY3Q9BT09 278 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 DUSP23Q9BVJ7 150 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 FRMD8Q9BZ67 464 aaPredicted RBP5.13□□□□□ -1.59
SF3B6-202ENST00000478050 SDCBP2Q9H190 292 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ECT2Q9H8V3 914 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ZWILCHQ9H900 591 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 RSAD1Q9HA92 442 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 RXFP1Q9HBX9 757 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ABCF3Q9NUQ8 709 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ERAP1Q9NZ08 941 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 KLHL14Q9P2G3 628 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 SIX4Q9UIU6 781 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ITGA11Q9UKX5 1188 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 PCOLCE2Q9UKZ9 415 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ZMYND8Q9ULU4 1186 aaPredicted RBP5.13□□□□□ -1.59
SF3B6-202ENST00000478050 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.13□□□□□ -1.59
SF3B6-202ENST00000478050 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.13□□□□□ -1.59
SF3B6-202ENST00000478050 ATRXP46100 2492 aa5.13□□□□□ -1.59
SF3B6-202ENST00000478050 CENPFP49454 3210 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 CFAP69A5D8W1 941 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 MANSC4A6NHS7 340 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF487B1APH4 448 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 M0QYV0 167 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 TM9SF1O15321 606 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 B4GALT5O43286 388 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 SPAG7O75391 227 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 DCTN3O75935 186 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ENDOD1O94919 500 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ATP6V1G2O95670 118 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 B3GALT4O96024 378 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 GH1P01241 217 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ERBB2P04626 1255 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ITGB3P05106 788 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 PGK2P07205 417 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 GJB1P08034 283 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 TXNP10599 105 aaKnown RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 RBP3P10745 1247 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ALADP13716 330 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 TGM2P21980 687 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 CA4P22748 312 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 IL1R2P27930 398 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 MIPP30301 263 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ALDH3A1P30838 453 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 STIP1P31948 543 aaKnown RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 FOXN2P32314 431 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 RPL22P35268 128 aaKnown RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 MSH2P43246 934 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 GPD2P43304 727 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 MAGEA10P43363 369 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 CLCN3P51790 818 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF143P52747 638 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 GEMIN4P57678 1058 aaKnown RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 SNX16P57768 344 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 OSTNP61366 133 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 DYNLT1P63172 113 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 MRPS5P82675 430 aaKnown RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 RBP5P82980 135 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ROR1Q01973 937 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ID3Q02535 119 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ARHGAP1Q07960 439 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 INCA1Q0VD86 236 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 TMEM132DQ14C87 1099 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 FASTKD3Q14CZ7 662 aaKnown RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 PDK2Q15119 407 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 NOMO1Q15155 1222 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 ZKSCAN8Q15776 578 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 PDK4Q16654 411 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 PREPLQ4J6C6 727 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 FAM133BQ5BKY9 247 aaKnown RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 SPDYAQ5MJ70 313 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 TMEM63BQ5T3F8 832 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 FAM102AQ5T9C2 384 aaPredicted RBP5.12□□□□□ -1.59
SF3B6-202ENST00000478050 HHATQ5VTY9 493 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 KIAA0319Q5VV43 1072 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 SCARA3Q6AZY7 606 aa5.12□□□□□ -1.59
SF3B6-202ENST00000478050 JADE1Q6IE81 842 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms