RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 CDKL2Q92772 493 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 PGAP3Q96FM1 320 aaPredicted RBP10.79□□□□□ -0.68
MINDY3-206ENST00000477891 AGAP2Q99490 1192 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 APBA2Q99767 749 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 APOL2Q9BQE5 337 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 EBF4Q9BQW3 602 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 BTBD10Q9BSF8 475 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 UBP1Q9NZI7 540 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 ZFATQ9P243 1243 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 CDH9Q9ULB4 789 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 C15orf41Q9Y2V0 281 aa10.79□□□□□ -0.68
MINDY3-206ENST00000477891 TNPO2O14787 897 aaKnown RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 BIRC5O15392 142 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 LYPLA1O75608 230 aaPredicted RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CAPN15O75808 1086 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 POLBP06746 335 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 TPH1P17752 444 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 MAP2K2P36507 400 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 RPL10AP62906 217 aaKnown RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 PDE1BQ01064 536 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 STX3Q13277 289 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CERCAMQ5T4B2 595 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 KCTD11Q693B1 232 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CD300LGQ6UXG3 332 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 KYAT3Q6YP21 454 aaKnown RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 RASAL3Q86YV0 1011 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CCNJLQ8IV13 435 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 TRIM42Q8IWZ5 723 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 FBXO27Q8NI29 283 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 SCAMP5Q8TAC9 235 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 MYLPFQ96A32 169 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 MFSD3Q96ES6 412 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CERS2Q96G23 380 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 ATXN7L3BQ96GX2 97 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CELF6Q96J87 481 aaKnown RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 FERMT1Q9BQL6 677 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 TACO1Q9BSH4 297 aaKnown RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 MLPHQ9BV36 600 aaPredicted RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CSNK1G1Q9HCP0 422 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 NOP53Q9NZM5 478 aaKnown RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 MRPL42Q9Y6G3 142 aaKnown RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 TTC3P53804 2025 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 ZCWPW2A0A1B0GU75 182 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CAPN14A8MX76 684 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 F8W810 466 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 GYG2O15488 501 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 PLIN3O60664 434 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 WFS1O76024 890 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 AP2A1O95782 977 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 FGF3P11487 239 aaPredicted RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CD52P31358 61 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 ARRB2P32121 409 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 GARSP41250 739 aaKnown RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 ABCG1P45844 678 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CPA2P48052 419 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 HCAR3P49019 387 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CXCR3P49682 368 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 PGFP49763 221 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 AIF1P55008 147 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 MBLAC2Q68D91 279 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CMC1Q7Z7K0 106 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 TMEM135Q86UB9 458 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 TAC4Q86UU9 113 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 SERINC5Q86VE9 423 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 RASSF3Q86WH2 238 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CRLF3Q8IUI8 442 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 DNAAF3Q8N9W5 541 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 KCNV2Q8TDN2 545 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 SMARCD1Q96GM5 515 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 ZNF778Q96MU6 729 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 MTG1Q9BT17 334 aaPredicted RBP10.78□□□□□ -0.68
MINDY3-206ENST00000477891 NAT9Q9BTE0 207 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 RNPEPL1Q9HAU8 725 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 CHRAC1Q9NRG0 131 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 TMEM216Q9P0N5 145 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 VANGL2Q9ULK5 521 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 GIT1Q9Y2X7 761 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 PTCH2Q9Y6C5 1203 aa10.78□□□□□ -0.68
MINDY3-206ENST00000477891 H0Y3Z8 333 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 ATP9BO43861 1147 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 ITGB1P05556 798 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 SRGAP2BP0DMP2 458 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 ESRRAP11474 423 aaPredicted RBP10.77□□□□□ -0.69
MINDY3-206ENST00000477891 CALB2P22676 271 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 GALNT2Q10471 571 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 KRT72Q14CN4 511 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 KHDC1Q4VXA5 237 aaKnown RBP10.77□□□□□ -0.69
MINDY3-206ENST00000477891 TEDDM1Q5T9Z0 273 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 PM20D1Q6GTS8 502 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 FAM171BQ6P995 826 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 C4orf50Q6ZRC1 276 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 IFNL1Q8IU54 200 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 OR10T2Q8NGX3 314 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 ACMSDQ8TDX5 336 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 DPF3Q92784 378 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 ZNF669Q96BR6 464 aaPredicted RBP10.77□□□□□ -0.69
MINDY3-206ENST00000477891 NUDCD1Q96RS6 583 aa10.77□□□□□ -0.69
MINDY3-206ENST00000477891 CHST12Q9NRB3 414 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms