RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 HOXC13P31276 330 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 HTR7P34969 479 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 SLC1A1P43005 524 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 SSR1P43307 286 aaKnown RBP13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 MAGEA9P43362 315 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 KIF5AQ12840 1032 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 LMAN2Q12907 356 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 ZNF177Q13360 481 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 CDH18Q13634 790 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 DPYSL2Q16555 572 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 GEN1Q17RS7 908 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 SMTNL2Q2TAL5 461 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 FBXO43Q4G163 708 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 CXorf57Q6NSI4 855 aaKnown RBP13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 C11orf63Q6NUN7 778 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 NUDT18Q6ZVK8 323 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 ANKS1BQ7Z6G8 1248 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 TMEM105Q8N8V8 129 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 TPCN2Q8NHX9 752 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 KCTD15Q96SI1 283 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 KCNF1Q9H3M0 494 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 RETREG1Q9H6L5 497 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 ABCB8Q9NUT2 735 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 KIAA1522Q9P206 1035 aaPredicted RBP13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 GGA2Q9UJY4 613 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 TBC1D30Q9Y2I9 924 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 STARD13Q9Y3M8 1113 aa13.59□□□□□ -0.23
EXOSC1-209ENST00000477692 ANTXRLA6NF34 631 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 EEF2KO00418 725 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 CREB3O43889 395 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 RNF40O75150 1001 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 CCDC175P0C221 793 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 PABPC1P11940 636 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 RHOQP17081 205 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 COMTP21964 271 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 ZNF135P52742 658 aaPredicted RBP13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 CCDC173Q0VFZ6 552 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 TMEM215Q68D42 235 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 RWDD4Q6NW29 188 aaKnown RBP13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 POLNQ7Z5Q5 900 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 ADIPOR2Q86V24 386 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 NLRP14Q86W24 1093 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 AHI1Q8N157 1196 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 CCDC26Q8TAB7 109 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 FAM71BQ8TC56 605 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 WFIKKN2Q8TEU8 576 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 HSPH1Q92598 858 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 CHRDQ9H2X0 955 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 TRIM10Q9UDY6 481 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 HCN2Q9UL51 889 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 ALG6Q9Y672 507 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 CHD5Q8TDI0 1954 aa13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 MUC22E2RYF6 1773 aaPredicted RBP13.58□□□□□ -0.24
EXOSC1-209ENST00000477692 WASH4PA8MWX3 477 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 RHOCP08134 193 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 KRT7P08729 469 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 GOT1P17174 413 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 EPHB2P29323 1055 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 AVPR2P30518 371 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 CSKP41240 450 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 KIR2DL1P43626 348 aaPredicted RBP13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 HCAR3P49019 387 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 ARSEP51690 589 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 PLK1P53350 603 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 NAP1L1P55209 391 aaKnown RBP13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 SEC13P55735 322 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 OXCT1P55809 520 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 TPI1P60174 286 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 MRPS21P82921 87 aaKnown RBP13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 SLC12A1Q13621 1099 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 GAS6Q14393 721 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 DMC1Q14565 340 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 EIF4HQ15056 248 aaKnown RBP13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 ATP13A4Q4VNC1 1196 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 PPP6R3Q5H9R7 873 aaPredicted RBP13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 PITRM1Q5JRX3 1037 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 C6orf118Q5T5N4 469 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 EMC10Q5UCC4 262 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 ZNF662Q6ZS27 426 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 Q6ZS52 159 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 TFAP2DQ7Z6R9 452 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 SETD3Q86TU7 594 aaPredicted RBP13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 OR52K2Q8NGK3 314 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 KCNV2Q8TDN2 545 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 USP33Q8TEY7 942 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 ZNF830Q96NB3 372 aaPredicted RBP13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 IER2Q9BTL4 223 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 LRFN3Q9BTN0 628 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 TSGA10Q9BZW7 698 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 GOLPH3Q9H4A6 298 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 TMEM248Q9NWD8 314 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 ELOVL2Q9NXB9 296 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 INTS6Q9UL03 887 aaKnown RBP13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 HYOU1Q9Y4L1 999 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 ATG2BQ96BY7 2078 aa13.57□□□□□ -0.24
EXOSC1-209ENST00000477692 CUL9Q8IWT3 2517 aa13.56□□□□□ -0.24
EXOSC1-209ENST00000477692 MACROD2A1Z1Q3 448 aa13.56□□□□□ -0.24
EXOSC1-209ENST00000477692 CHURC1-FNTBB4DL54 471 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms