RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 FAM153BP0C7A2 387 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 GTF2H1P32780 548 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 NUP62P37198 522 aaPredicted RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 MSH2P43246 934 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 MAGEA11P43364 429 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 CAPZA2P47755 286 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 HTRA3P83110 453 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 CHRNEQ04844 493 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SRSF11Q05519 484 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 DSC1Q08554 894 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 TFCP2Q12800 502 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 TSTQ16762 297 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 PLA1AQ53H76 456 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 TTC22Q5TAA0 569 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 IDO2Q6ZQW0 420 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 KRT28Q7Z3Y7 464 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 RALGPS2Q86X27 583 aaPredicted RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SLC9A9Q8IVB4 645 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 TSEN2Q8NCE0 465 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 PDZD8Q8NEN9 1154 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 BBS10Q8TAM1 723 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 DTD1Q8TEA8 209 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 LRRC39Q96DD0 335 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 CHMP6Q96FZ7 201 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 EAF1Q96JC9 268 aaPredicted RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 TAAR9Q96RI9 348 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 NUP88Q99567 741 aaPredicted RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 PSD2Q9BQI7 771 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SPON2Q9BUD6 331 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 RNF38Q9H0F5 515 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 KCNH6Q9H252 994 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SLC26A1Q9H2B4 701 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SNX15Q9NRS6 342 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SLC35D1Q9NTN3 355 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 BAIAP2L1Q9UHR4 511 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 PIN4Q9Y237 131 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 WDR7Q9Y4E6 1490 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 WDR91A4D1P6 747 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 ARGFXA6NJG6 315 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SOCS6O14544 535 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 EFCAB14O75071 495 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 DKK1O94907 266 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 TUBB4AP04350 444 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 FHP07954 510 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 PLEKP08567 350 aaPredicted RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 MLNP12872 115 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 NCF1P14598 390 aaPredicted RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 GJA1P17302 382 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SYN1P17600 705 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 TNNI3P19429 210 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 ITGAXP20702 1163 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 STAT5AP42229 794 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 GABRB2P47870 512 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 GSSP48637 474 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 EPHA4P54764 986 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SCRN3Q0VDG4 424 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 ABRQ12979 859 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 UBAP2LQ14157 1087 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SWI5Q1ZZU3 235 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 KRT24Q2M2I5 525 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 RASIP1Q5U651 963 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 ANKRD40Q6AI12 368 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 KCNT2Q6UVM3 1135 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 NECAB2Q7Z6G3 386 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SRRM1Q8IYB3 904 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 ELMOD2Q8IZ81 293 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 ADGRG5Q8IZF4 528 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 SRFBP1Q8NEF9 429 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 MCPH1Q8NEM0 835 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 ADCY4Q8NFM4 1077 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 CREB3L4Q8TEY5 395 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 ZDHHC1Q8WTX9 485 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 FAM122AQ96E09 287 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 CNOT6LQ96LI5 555 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 QRFPRQ96P65 431 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 GBP5Q96PP8 586 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 APOL6Q9BWW8 343 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 FAM114A2Q9NRY5 505 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 KRT84Q9NSB2 600 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 KLHL3Q9UH77 587 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 DIMT1Q9UNQ2 313 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 PCDHGB2Q9Y5G2 931 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 GMPPBQ9Y5P6 360 aa6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 TARBP1Q13395 1621 aaKnown RBP6.11□□□□□ -1.43
SPTLC3-205ENST00000476791 KTN1Q86UP2 1357 aaKnown RBP6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 A8MXE2 369 aa6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 MIF4GDA9UHW6 222 aaKnown RBP6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 C22orf46C9J442 243 aa6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 E9PBE3 544 aa6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 hCG_2039718K7EN88 272 aa6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 ZNF197O14709 1029 aa6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 FANCGO15287 622 aa6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 KCNN4O15554 427 aa6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 PQBP1O60828 265 aaKnown RBP6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 TADA2AO75478 443 aa6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 ITGB6P18564 788 aa6.1□□□□□ -1.43
SPTLC3-205ENST00000476791 ITGALP20701 1170 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms