RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 NSUN3Q9H649 340 aaKnown RBP18.61■□□□□ 0.57
ATG4B-217ENST00000475693 STIM2Q9P246 746 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 SGK1O00141 431 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 IGFBP4P22692 258 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 CARSP49589 748 aaKnown RBP18.61■□□□□ 0.57
ATG4B-217ENST00000475693 SYCP2LQ5T4T6 812 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 SYCE2Q6PIF2 218 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 CCDC26Q8TAB7 109 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 TBC1D31Q96DN5 1066 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 C1orf74Q96LT6 269 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 GDAP1L1Q96MZ0 367 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 KLC2Q9H0B6 622 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 RCOR3Q9P2K3 495 aaPredicted RBP18.61■□□□□ 0.57
ATG4B-217ENST00000475693 HPCAL4Q9UM19 191 aa18.61■□□□□ 0.57
ATG4B-217ENST00000475693 MRPS23Q9Y3D9 190 aaKnown RBP18.61■□□□□ 0.57
ATG4B-217ENST00000475693 C2orf16Q68DN1 1984 aa18.6■□□□□ 0.57
ATG4B-217ENST00000475693 TRAV19A0A0A6YYK7 116 aa18.6■□□□□ 0.57
ATG4B-217ENST00000475693 F5H423 210 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-217ENST00000475693 ECEL1O95672 775 aa18.6■□□□□ 0.57
ATG4B-217ENST00000475693 SYF2O95926 243 aaKnown RBP18.6■□□□□ 0.57
ATG4B-217ENST00000475693 TGM2P21980 687 aa18.6■□□□□ 0.57
ATG4B-217ENST00000475693 FNTAP49354 379 aa18.6■□□□□ 0.57
ATG4B-217ENST00000475693 PPP1R7Q15435 360 aa18.6■□□□□ 0.57
ATG4B-217ENST00000475693 CMTM8Q8IZV2 173 aa18.6■□□□□ 0.57
ATG4B-217ENST00000475693 PRICKLE1Q96MT3 831 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-217ENST00000475693 ZFP37Q9Y6Q3 630 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-217ENST00000475693 LEFTY2O00292 366 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 MCF2LO15068 1137 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 RNF40O75150 1001 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 HCAR3P49019 387 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 KPNA1P52294 538 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-217ENST00000475693 MAATS1Q7Z4T9 603 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 BBS7Q8IWZ6 715 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 CCNYQ8ND76 341 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 USP13Q92995 863 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-217ENST00000475693 PLD4Q96BZ4 506 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 NEU2Q9Y3R4 380 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 ZNF487B1APH4 448 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 VAV1P15498 845 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 AVPR1AP37288 418 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 VSIG1Q86XK7 387 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 OR52K2Q8NGK3 314 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 SH3RF2Q8TEC5 729 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 NKD2Q969F2 451 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-217ENST00000475693 LRRC3BQ96PB8 259 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 NEUROG2Q9H2A3 272 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 USP29Q9HBJ7 922 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 PLK2Q9NYY3 685 aa18.59■□□□□ 0.57
ATG4B-217ENST00000475693 DFFAO00273 331 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 KCNN4O15554 427 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 RPL21P46778 160 aaKnown RBP18.58■□□□□ 0.57
ATG4B-217ENST00000475693 SLC11A2P49281 568 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 SLC7A9P82251 487 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 AP1B1Q10567 949 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 PAFAH1B3Q15102 231 aaKnown RBP18.58■□□□□ 0.57
ATG4B-217ENST00000475693 LRIT3Q3SXY7 679 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 CCDC70Q6NSX1 233 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 NLRP14Q86W24 1093 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 ALLCQ8N6M5 410 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 TTC13Q8NBP0 860 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 SLC39A8Q9C0K1 460 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 TASP1Q9H6P5 420 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 NOL6Q9H6R4 1146 aaKnown RBP18.58■□□□□ 0.57
ATG4B-217ENST00000475693 SFXN1Q9H9B4 322 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 CLEC1BQ9P126 229 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 MTCH2Q9Y6C9 303 aa18.58■□□□□ 0.57
ATG4B-217ENST00000475693 KRT14P02533 472 aa18.58■□□□□ 0.56
ATG4B-217ENST00000475693 LRRC31Q6UY01 552 aa18.58■□□□□ 0.56
ATG4B-217ENST00000475693 CCNI2Q6ZMN8 369 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-217ENST00000475693 ARID3BQ8IVW6 561 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-217ENST00000475693 ARHGAP12Q8IWW6 846 aa18.58■□□□□ 0.56
ATG4B-217ENST00000475693 OLFM3Q96PB7 478 aa18.58■□□□□ 0.56
ATG4B-217ENST00000475693 ERP44Q9BS26 406 aa18.58■□□□□ 0.56
ATG4B-217ENST00000475693 SEPT10Q9P0V9 454 aa18.58■□□□□ 0.56
ATG4B-217ENST00000475693 NFU1Q9UMS0 254 aa18.58■□□□□ 0.56
ATG4B-217ENST00000475693 F5H5T6 163 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 KCNK1O00180 336 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 TBX10O75333 385 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 HOXC13P31276 330 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 VIPR2P41587 438 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 DHX34Q14147 1143 aaKnown RBP18.57■□□□□ 0.56
ATG4B-217ENST00000475693 GLE1Q53GS7 698 aaKnown RBP18.57■□□□□ 0.56
ATG4B-217ENST00000475693 ADGRF1Q5T601 910 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 TPGS1Q6ZTW0 290 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.57■□□□□ 0.56
ATG4B-217ENST00000475693 ZYG11BQ9C0D3 744 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 LINC00597Q9H2U6 94 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 HOMER3Q9NSC5 361 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 ASIC3Q9UHC3 531 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 DPP7Q9UHL4 492 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 MYOFQ9NZM1 2061 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 SHOX2O60902 331 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-217ENST00000475693 C1RP00736 705 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 ITGAVP06756 1048 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 ZFXP17010 805 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-217ENST00000475693 DUPD1Q68J44 220 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 ANKRD54Q6NXT1 300 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 DRICH1Q6PGQ1 229 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-217ENST00000475693 Q6ZNB5 142 aa18.57■□□□□ 0.56
ATG4B-217ENST00000475693 RTL10Q7L3V2 364 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms