RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 CDH18Q13634 790 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 DPYSL3Q14195 570 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 KRT81Q14533 505 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 PDK2Q15119 407 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 PON2Q15165 354 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 FSCBQ5H9T9 825 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 TMEM196Q5HYL7 178 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 CXorf57Q6NSI4 855 aaKnown RBP22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 TRIM67Q6ZTA4 783 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 RFX8Q6ZV50 586 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 TFAP2DQ7Z6R9 452 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 SUGP1Q8IWZ8 645 aaKnown RBP22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 RAPGEF5Q92565 580 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 ARHGEF4Q9NR80 690 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 TMEM248Q9NWD8 314 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 RCOR3Q9P2K3 495 aaPredicted RBP22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 TBC1D30Q9Y2I9 924 aa22.82■■□□□ 1.24
MCF2L2-209ENST00000475664 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 GOLGA6L9A6NEM1 432 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 WASH4PA8MWX3 477 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 PI4K2BG5E9Z4 385 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 H0Y626 953 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 FGF10O15520 208 aaPredicted RBP22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 KRT1P04264 644 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 CD72P21854 359 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 IL4RP24394 825 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 ARL4AP40617 200 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 ZNF177Q13360 481 aaPredicted RBP22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 DPYSQ14117 519 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 ZNF852Q6ZMS4 543 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 CCDC117Q8IWD4 279 aaPredicted RBP22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 KATNAL2Q8IYT4 538 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 RTL3Q8N8U3 475 aaKnown RBP22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 TERB1Q8NA31 727 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 KCTD6Q8NC69 237 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 TRIM58Q8NG06 486 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 EXOC4Q96A65 974 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 CSPG4P5Q96PW8 444 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 ALS2CR12Q96Q35 445 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 CATSPERBQ9H7T0 1116 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 KCND1Q9NSA2 647 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 PCDHA3Q9Y5H8 950 aa22.81■■□□□ 1.24
MCF2L2-209ENST00000475664 CCDC66A2RUB6 948 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 LRRD1A4D1F6 860 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 C3orf70A6NLC5 250 aaPredicted RBP22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 KAT7O95251 611 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 KDELR1P24390 212 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 CD70P32970 193 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 MAPKAPK2P49137 400 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 LMAN2Q12907 356 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 MMRN1Q13201 1228 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 HS1BP3Q53T59 392 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 ZFYVE27Q5T4F4 411 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 FSTL4Q6MZW2 842 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 KIAA0907Q7Z7F0 614 aaPredicted RBP22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 SETD3Q86TU7 594 aaPredicted RBP22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 MAP7D3Q8IWC1 876 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 ZNF687Q8N1G0 1237 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 OR52K2Q8NGK3 314 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 EZH1Q92800 747 aaPredicted RBP22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 FAF2Q96CS3 445 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 ZNF670Q9BS34 389 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 TBC1D17Q9HA65 648 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 ABCB8Q9NUT2 735 aa22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.8■■□□□ 1.24
MCF2L2-209ENST00000475664 A0A0A0MRY4 1105 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 KANSL1LA0AUZ9 987 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 MIF4GDA9UHW6 222 aaKnown RBP22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 ZNF487B1APH4 448 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 TNFRSF10AO00220 468 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 GRIA2P42262 883 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 PEX5P50542 639 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 GEN1Q17RS7 908 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 PREPLQ4J6C6 727 aaPredicted RBP22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 ANKS1BQ7Z6G8 1248 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 VSIG1Q86XK7 387 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 SFTPA1Q8IWL2 248 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 UBE2Q2Q8WVN8 375 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 HES6Q96HZ4 224 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 CALN1Q9BXU9 219 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 LTB4R2Q9NPC1 389 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 NDFIP2Q9NV92 336 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 KIAA1522Q9P206 1035 aaPredicted RBP22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 GGA2Q9UJY4 613 aa22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 PACSIN2Q9UNF0 486 aaPredicted RBP22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 MRPS17Q9Y2R5 130 aaKnown RBP22.79■■□□□ 1.24
MCF2L2-209ENST00000475664 DAPK3O43293 454 aa22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 APODP05090 189 aa22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 RHOCP08134 193 aa22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 PABPC1P11940 636 aaKnown RBP22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 ERCC2P18074 760 aa22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 DRD1P21728 446 aa22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 TARSP26639 723 aaKnown RBP22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 OR1E1P30953 314 aa22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 OXCT1P55809 520 aa22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 GRSF1Q12849 480 aaKnown RBP eCLIP22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 C6orf118Q5T5N4 469 aa22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 WFIKKN2Q8TEU8 576 aa22.78■■□□□ 1.24
MCF2L2-209ENST00000475664 ALG3Q92685 438 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms