RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ANKS6Q68DC2 871 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF57Q68EA5 555 aaPredicted RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 KLHL17Q6TDP4 642 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 ZBTB49Q6ZSB9 765 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF410Q86VK4 478 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 NT5DC4Q86YG4 428 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 POMGNT2Q8NAT1 580 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 USP33Q8TEY7 942 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 ADI1Q9BV57 179 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 DBNDD1Q9H9R9 158 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 CAPN10Q9HC96 672 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 RPS6KB2Q9UBS0 482 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 HERC5Q9UII4 1024 aaKnown RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 SLC39A10Q9ULF5 831 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 TTLL13PA6NNM8 815 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 H3BSA7 217 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 PPEF1O14829 653 aaPredicted RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 PSTPIP1O43586 416 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 ADAM23O75077 832 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 TSPAN9O75954 239 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 FCGR1AP12314 374 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 CPA3P15088 417 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 PTGER2P43116 358 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 CRKP46108 304 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 OASLQ15646 514 aaKnown RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 AAGABQ6PD74 315 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 TRIM48Q8IWZ4 208 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF384Q8TF68 577 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 SLC17A7Q9P2U7 560 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 GABBR1Q9UBS5 961 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 STK39Q9UEW8 545 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 PDGFRBP09619 1106 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 PAICSP22234 425 aaKnown RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 RCVRNP35243 200 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 STT3AP46977 705 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 XIAPP98170 497 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 CBFBQ13951 182 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 BCL2A1Q16548 175 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 IZUMO1Q8IYV9 350 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 PLEKHO2Q8TD55 490 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 TCP10LQ8TDR4 215 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 DCAF4Q8WV16 495 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 MAGED4Q96JG8 741 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF512Q96ME7 567 aaPredicted RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 KLF6Q99612 283 aaPredicted RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 PRDM5Q9NQX1 630 aaPredicted RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 FAM237BA0A1B0GVD1 139 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 FAM220BPB1ANY3 271 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 TBC1D12O60347 775 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 RAD17O75943 681 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 GH2P01242 217 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 IL6STP40189 918 aaPredicted RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 ITGA7Q13683 1181 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 AGAP9Q5VTM2 703 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 SLC2A7Q6PXP3 512 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 MARVELD2Q8N4S9 558 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 STN1Q9H668 368 aaKnown RBP11.75□□□□□ -0.53
U2AF1-209ENST00000475639 RSAD1Q9HA92 442 aa11.75□□□□□ -0.53
U2AF1-209ENST00000475639 CD48P09326 243 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 FDX1P10109 184 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 PSMB9P28065 219 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 RBP5P82980 135 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 ACAP1Q15027 740 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 ARSHQ5FYA8 562 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 MRNIPQ6NTE8 343 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 GIPC3Q8TF64 312 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 USP13Q92995 863 aaPredicted RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 DYNLL2Q96FJ2 89 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 SNX27Q96L92 541 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 SENP7Q9BQF6 1050 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 PDCD10Q9BUL8 212 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 C17orf75Q9HAS0 396 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 HBS1LQ9Y450 684 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 LRP5O75197 1615 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 A0A088AWK7 358 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L3A6NCW0 530 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L4A6NCW7 530 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 LRRC14BA6NHZ5 514 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 PPP2R1BP30154 601 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 GRIK1P39086 918 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 SNAPC2Q13487 334 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 TCEAL1Q15170 157 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 ZRANB3Q5FWF4 1079 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 SWSAP1Q6NVH7 229 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 PRMT9Q6P2P2 845 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 KYAT3Q6YP21 454 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 USP17L1Q7RTZ2 530 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 SLC5A5Q92911 643 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 SGF29Q96ES7 293 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 PPP1R10Q96QC0 940 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 PAIP1Q9H074 479 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 SLITRK2Q9H156 845 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 RNF146Q9NTX7 359 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 ENOPH1Q9UHY7 261 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 TRMT6Q9UJA5 497 aaKnown RBP11.74□□□□□ -0.53
U2AF1-209ENST00000475639 IPPQ9Y573 584 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 CEPT1Q9Y6K0 416 aa11.74□□□□□ -0.53
U2AF1-209ENST00000475639 KCPQ6ZWJ8 1503 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms