RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PABPC1P11940 636 aaKnown RBP17.45■□□□□ 0.38
SCAF11-206ENST00000474828 CD70P32970 193 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 ARHGAP25P42331 645 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 CCR3P51677 355 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 ZNF135P52742 658 aaPredicted RBP17.45■□□□□ 0.38
SCAF11-206ENST00000474828 LMAN2Q12907 356 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 E2F5Q15329 346 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 ALFQ53S48 1182 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 EMC10Q5UCC4 262 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 LRRC31Q6UY01 552 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 SETD3Q86TU7 594 aaPredicted RBP17.45■□□□□ 0.38
SCAF11-206ENST00000474828 KDM1BQ8NB78 822 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 SLC35G2Q8TBE7 412 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 FAM71BQ8TC56 605 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 ACDQ96AP0 544 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 GABRG3Q99928 467 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 MAGEB5Q9BZ81 275 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 ZYG11BQ9C0D3 744 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 ABCB8Q9NUT2 735 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 C2orf42Q9NWW7 574 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 KIAA1522Q9P206 1035 aaPredicted RBP17.45■□□□□ 0.38
SCAF11-206ENST00000474828 THAP10Q9P2Z0 257 aaPredicted RBP17.45■□□□□ 0.38
SCAF11-206ENST00000474828 MMP17Q9ULZ9 603 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 PCDHA13Q9Y5I0 950 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 SNX10Q9Y5X0 201 aa17.45■□□□□ 0.38
SCAF11-206ENST00000474828 MUC22E2RYF6 1773 aaPredicted RBP17.45■□□□□ 0.38
SCAF11-206ENST00000474828 CXorf51AA0A1B0GTR3 108 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 BTNL10A8MVZ5 291 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 WASH4PA8MWX3 477 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 ABCB7O75027 752 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 ADAM23O75077 832 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 CNTN5O94779 1100 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 LRIG2O94898 1065 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 IL1R2P27930 398 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 GGCXP38435 758 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 MAGEA1P43355 309 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 CXCL12P48061 93 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 HCAR3P49019 387 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 SLC25A11Q02978 314 aaKnown RBP17.44■□□□□ 0.38
SCAF11-206ENST00000474828 TCF15Q12870 199 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 BOLA3Q53S33 107 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 EFHC2Q5JST6 749 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 ERMARDQ5T6L9 678 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 ZNF783Q6ZMS7 281 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 TRMT11Q7Z4G4 463 aaKnown RBP17.44■□□□□ 0.38
SCAF11-206ENST00000474828 SPC24Q8NBT2 197 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 PRSS33Q8NF86 280 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 OR52K2Q8NGK3 314 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 RPLP0P6Q8NHW5 317 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 TEKT4Q8WW24 435 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 OSGEPQ9NPF4 335 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 STIM2Q9P246 746 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 CTTNBP2NLQ9P2B4 639 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 USP18Q9UMW8 372 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 PIEZO1Q92508 2521 aa17.44■□□□□ 0.38
SCAF11-206ENST00000474828 DOCK4Q8N1I0 1966 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 CCDC163A0A0D9SF12 145 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 PJA2O43164 708 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 RHOQP17081 205 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 MRE11P49959 708 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 CDH18Q13634 790 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 SPA17Q15506 151 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 DPYSL2Q16555 572 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 PTPRNQ16849 979 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 PLEKHG6Q3KR16 790 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 FUT11Q495W5 492 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 EGFLAMQ63HQ2 1017 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 CARNMT1Q8N4J0 409 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 CAMKK1Q8N5S9 505 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 MYO19Q96H55 970 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 FEM1AQ9BSK4 669 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 SNRNP25Q9BV90 132 aaKnown RBP17.43■□□□□ 0.38
SCAF11-206ENST00000474828 FAM126AQ9BYI3 521 aaPredicted RBP17.43■□□□□ 0.38
SCAF11-206ENST00000474828 TMEM245Q9H330 911 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 TMEM248Q9NWD8 314 aa17.43■□□□□ 0.38
SCAF11-206ENST00000474828 SPATA6Q9NWH7 488 aaPredicted RBP17.43■□□□□ 0.38
SCAF11-206ENST00000474828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.42■□□□□ 0.38
SCAF11-206ENST00000474828 ILVBLA1L0T0 632 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 H0Y626 953 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 PRPSAP2O60256 369 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 ASLP04424 464 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 DLDP09622 509 aaKnown RBP17.42■□□□□ 0.38
SCAF11-206ENST00000474828 TCF4P15884 667 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 NTSR1P30989 418 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 MAPKAPK2P49137 400 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 SATB1Q01826 763 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 ZNF177Q13360 481 aaPredicted RBP17.42■□□□□ 0.38
SCAF11-206ENST00000474828 ANGPT1Q15389 498 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 C2orf27AQ580R0 203 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 PITRM1Q5JRX3 1037 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 MBLAC2Q68D91 279 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 SCYL2Q6P3W7 929 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 CIR1Q86X95 450 aaPredicted RBP17.42■□□□□ 0.38
SCAF11-206ENST00000474828 PYROXD2Q8N2H3 581 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 ALLCQ8N6M5 410 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 ZNF513Q8N8E2 541 aaPredicted RBP17.42■□□□□ 0.38
SCAF11-206ENST00000474828 BTBD6Q96KE9 485 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 CALR3Q96L12 384 aaKnown RBP17.42■□□□□ 0.38
SCAF11-206ENST00000474828 MRGPRX3Q96LB0 322 aa17.42■□□□□ 0.38
SCAF11-206ENST00000474828 PPP1R9BQ96SB3 815 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms