RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 PENKP01210 267 aaPredicted RBP10.31□□□□□ -0.76
COL8A1-206ENST00000474648 BMP1P13497 986 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 ERCC2P18074 760 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 EPHB2P29323 1055 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 GDI1P31150 447 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 ARL4AP40617 200 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 IFNAR2P48551 515 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 TPI1P60174 286 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 TNK2Q07912 1038 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 PDGFRLQ15198 375 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 AAK1Q2M2I8 961 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 GAB4Q2WGN9 574 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 MPPE1Q53F39 396 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 TFDP3Q5H9I0 405 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 LY6G5CQ5SRR4 150 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 ZFYVE27Q5T4F4 411 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 FYB2Q5VWT5 728 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 SLC9A4Q6AI14 798 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 RWDD4Q6NW29 188 aaKnown RBP10.31□□□□□ -0.76
COL8A1-206ENST00000474648 TPGS1Q6ZTW0 290 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 CIR1Q86X95 450 aaPredicted RBP10.31□□□□□ -0.76
COL8A1-206ENST00000474648 CREG2Q8IUH2 290 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 RASGEF1CQ8N431 466 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 KCNV2Q8TDN2 545 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 NXPE3Q969Y0 559 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 MS4A14Q96JA4 679 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 RPRD1AQ96P16 312 aaPredicted RBP10.31□□□□□ -0.76
COL8A1-206ENST00000474648 TRMT61BQ9BVS5 477 aaKnown RBP10.31□□□□□ -0.76
COL8A1-206ENST00000474648 ZYG11BQ9C0D3 744 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 SPHK2Q9NRA0 654 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 NDFIP2Q9NV92 336 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 TMEM248Q9NWD8 314 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 TTC7AQ9ULT0 858 aaPredicted RBP10.31□□□□□ -0.76
COL8A1-206ENST00000474648 CLEC4EQ9ULY5 219 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 EFR3BQ9Y2G0 817 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 MFHAS1Q9Y4C4 1052 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 SAR1BQ9Y6B6 198 aa10.31□□□□□ -0.76
COL8A1-206ENST00000474648 DENND4AQ7Z401 1863 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 CEP104O60308 925 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 TBL1XO60907 577 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 CYP17A1P05093 508 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 ASGR2P07307 311 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 TCP1P17987 556 aaKnown RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 HOXD9P28356 352 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 CDH4P55283 916 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 ZP2Q05996 745 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 SLC10A2Q12908 348 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 KLF1Q13351 362 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 PAFAH1B3Q15102 231 aaKnown RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 SIX1Q15475 284 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 RABGAP1LQ5R372 815 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 MPP7Q5T2T1 576 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 AFMIDQ63HM1 303 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 KAZNQ674X7 775 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 NCBP2-AS2Q69YL0 99 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 CHST9Q7L1S5 443 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 SLC13A5Q86YT5 568 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 RFX6Q8HWS3 928 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 CCDC50Q8IVM0 306 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 ADHFE1Q8IWW8 467 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 YAF2Q8IY57 180 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 PLD5Q8N7P1 536 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 RTL3Q8N8U3 475 aaKnown RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 HJURPQ8NCD3 748 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 OR52K2Q8NGK3 314 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 DDI1Q8WTU0 396 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 ATXN2LQ8WWM7 1075 aaKnown RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 ZNF592Q92610 1267 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 LMLNQ96KR4 655 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 MAK16Q9BXY0 300 aaKnown RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 EBF3Q9H4W6 596 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 RETREG1Q9H6L5 497 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 NOL6Q9H6R4 1146 aaKnown RBP10.3□□□□□ -0.76
COL8A1-206ENST00000474648 ECT2Q9H8V3 914 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 PRDM16Q9HAZ2 1276 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 STIM2Q9P246 746 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 IGSF9Q9P2J2 1179 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 PRKAG3Q9UGI9 489 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 FBXO10Q9UK96 956 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 TBC1D30Q9Y2I9 924 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 C5orf42Q9H799 3197 aa10.3□□□□□ -0.76
COL8A1-206ENST00000474648 PDE2AO00408 941 aaPredicted RBP10.29□□□□□ -0.76
COL8A1-206ENST00000474648 FGF10O15520 208 aaPredicted RBP10.29□□□□□ -0.76
COL8A1-206ENST00000474648 HOXC11O43248 304 aaPredicted RBP10.29□□□□□ -0.76
COL8A1-206ENST00000474648 DAPK3O43293 454 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 CST8O60676 142 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 CLDN11O75508 207 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 NFATC1O95644 943 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 CISD3P0C7P0 127 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 RUNX3Q13761 415 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 TFDP2Q14188 446 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 ODF2Q5BJF6 829 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 FSCBQ5H9T9 825 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 SEL1L2Q5TEA6 688 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 TTC39BQ5VTQ0 682 aaPredicted RBP10.29□□□□□ -0.76
COL8A1-206ENST00000474648 CXorf57Q6NSI4 855 aaKnown RBP10.29□□□□□ -0.76
COL8A1-206ENST00000474648 NPNTQ6UXI9 565 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 BBS12Q6ZW61 710 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 TFAP2DQ7Z6R9 452 aa10.29□□□□□ -0.76
COL8A1-206ENST00000474648 SPNS2Q8IVW8 549 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms