RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 RAB21Q9UL25 225 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 TNFSF13BQ9Y275 285 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 C2CD4BA6NLJ0 364 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 KCNU1A8MYU2 1149 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 IPO5O00410 1097 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 TPD52L2O43399 206 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 TLR2O60603 784 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 ALDOCP09972 364 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 TMEM191BP0C7N4 346 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 RFPL3SP0C7P2 107 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 DHRS4L1P0CG22 281 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 CBSLP0DN79 551 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 GYS1P13807 737 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 CBSP35520 551 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 CPA2P48052 419 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 PNLIPRP1P54315 467 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 ADPRHP54922 357 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 ACTR2P61160 394 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 YPEL5P62699 121 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 GOLGA8FQ08AF8 430 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 LAMB3Q13751 1172 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 DCTN1Q14203 1278 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 DLGAP5Q15398 846 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 SUPT20HL1Q3ZLR7 823 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 GALNTL6Q49A17 601 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 EARS2Q5JPH6 523 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 C10orf76Q5T2E6 689 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 C10orf25Q5T742 122 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 GORABQ5T7V8 394 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 ZNF793Q6ZN11 406 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 CYB5R4Q7L1T6 521 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 RASGRP2Q7LDG7 609 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 TFAP2DQ7Z6R9 452 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 SMC5Q8IY18 1101 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 ANKRD42Q8N9B4 389 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 C16orf52Q8NHV5 167 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 GOLGA1Q92805 767 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 COQ8BQ96D53 544 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 SCLT1Q96NL6 688 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 FAM167BQ9BTA0 163 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 MECRQ9BV79 373 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 SORBS1Q9BX66 1292 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 QTRT1Q9BXR0 403 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 TASP1Q9H6P5 420 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 PDE11AQ9HCR9 933 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 SRP68Q9UHB9 627 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 AGO2Q9UKV8 859 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 SUFUQ9UMX1 484 aa3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 FNDC1Q4ZHG4 1894 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-213ENST00000474240 SLC22A23A1A5C7 686 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 KCNJ18B7U540 433 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 E7EVH7 732 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 M0QYT0 321 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 KIF1CO43896 1103 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 NBNO60934 754 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 ST6GAL1P15907 406 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 HOXB9P17482 250 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 PNPLA4P41247 253 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 KCNJ4P48050 445 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 B4GALNT1Q00973 533 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 ZNF91Q05481 1191 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 PPFIA1Q13136 1202 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 ALKBH1Q13686 389 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 TIGD6Q17RP2 521 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 TUBB8Q3ZCM7 444 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 FBXO47Q5MNV8 452 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 TTC39AQ5SRH9 613 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 VWA5B1Q5TIE3 1220 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 IGFN1Q86VF2 1251 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 KLBQ86Z14 1044 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 ADGRF4Q8IZF3 695 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 FAM185AQ8N0U4 392 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 TMEM57Q8N5G2 664 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 SLC44A5Q8NCS7 719 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 OR1N1Q8NGS0 311 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 ATP2A3Q93084 1043 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 SH3KBP1Q96B97 665 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 MCRS1Q96EZ8 462 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 ZFYVE19Q96K21 471 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 NOD2Q9HC29 1040 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 TMEM45AQ9NWC5 275 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 TRNAU1APQ9NX07 287 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 SLC25A13Q9UJS0 675 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 RIPOR2Q9Y4F9 1068 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 MORC2Q9Y6X9 1032 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 LMTK3Q96Q04 1460 aa3.65□□□□□ -1.83
ECHDC1-213ENST00000474240 PLEKHD1A6NEE1 506 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 C16orf96A6NNT2 1141 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 TP73O15350 636 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 TSPAN3O60637 253 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 MOSPD3O75425 235 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 BMP15O95972 392 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 CHRNA5P30532 468 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 HALP42357 657 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 ALDH7A1P49419 539 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 RPS6KA3P51812 740 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 RBM5P52756 815 aaKnown RBP eCLIP3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 FAM3BP58499 235 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 THOC5Q13769 683 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms