RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.23□□□□□ -0.61
C9orf3-214ENST00000473778 MAGED2Q9UNF1 606 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-214ENST00000473778 PIRO00625 290 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 CXCL11O14625 94 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 MAP3K7O43318 606 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 ZBTB14O43829 449 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 CREB3O43889 395 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 GPR32O75388 356 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 UBTFL6P0CB48 400 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-214ENST00000473778 SKIP12755 728 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 ZFXP17010 805 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-214ENST00000473778 PGAM1P18669 254 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 CNTFP26441 200 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 RANBP1P43487 201 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 SULT1E1P49888 294 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 IRF9Q00978 393 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 CDC16Q13042 620 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 HIC1Q14526 733 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 KYAT1Q16773 422 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 DNAL1Q4LDG9 190 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 STXBP5Q5T5C0 1151 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 UNC93AQ86WB7 457 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 OSTM1Q86WC4 334 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 CCNJLQ8IV13 435 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 WDR75Q8IWA0 830 aaKnown RBP11.22□□□□□ -0.61
C9orf3-214ENST00000473778 HACE1Q8IYU2 909 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 CRYBG2Q8N1P7 616 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 ARHGAP24Q8N264 748 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 LRRC52Q8N7C0 313 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 OR52K1Q8NGK4 314 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 FAM149B1Q96BN6 582 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 SGIP1Q9BQI5 828 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 MROH8Q9H579 483 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 SNX15Q9NRS6 342 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 PIGVQ9NUD9 493 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 LMCD1Q9NZU5 365 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 CACNG4Q9UBN1 327 aa11.22□□□□□ -0.61
C9orf3-214ENST00000473778 BAG2O95816 211 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 SNAI1O95863 264 aaPredicted RBP11.21□□□□□ -0.61
C9orf3-214ENST00000473778 SERPINE1P05121 402 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 ACAT1P24752 427 aaKnown RBP11.21□□□□□ -0.61
C9orf3-214ENST00000473778 GNL1P36915 607 aaPredicted RBP11.21□□□□□ -0.61
C9orf3-214ENST00000473778 FDFT1P37268 417 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 LRRC36Q1X8D7 754 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 ZNF792Q3KQV3 632 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 SLC25A52Q3SY17 297 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 FBXO47Q5MNV8 452 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 FRMD7Q6ZUT3 714 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 PAQR9Q6ZVX9 377 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 STRADAQ7RTN6 431 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 BNIPLQ7Z465 357 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 RASSF3Q86WH2 238 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 SULF1Q8IWU6 871 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 DCLK2Q8N568 766 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 ZNF781Q8N8C0 355 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 CCNYQ8ND76 341 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 ADAM32Q8TC27 787 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 ACMSDQ8TDX5 336 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 CCDC124Q96CT7 223 aaKnown RBP11.21□□□□□ -0.61
C9orf3-214ENST00000473778 CERS2Q96G23 380 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 PLEKHA5Q9HAU0 1116 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 CYP4F11Q9HBI6 524 aa11.21□□□□□ -0.61
C9orf3-214ENST00000473778 DDX43Q9NXZ2 648 aaKnown RBP11.21□□□□□ -0.61
C9orf3-214ENST00000473778 LOC100653049A0A140TA62 436 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 ASB14A6NK59 587 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 KPNA7A9QM74 516 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.21□□□□□ -0.62
C9orf3-214ENST00000473778 OPHN1O60890 802 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 KRT34O76011 436 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 FYNP06241 537 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 TYK2P29597 1187 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 ARL4AP40617 200 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 IREB2P48200 963 aaKnown RBP11.21□□□□□ -0.62
C9orf3-214ENST00000473778 GLUD2P49448 558 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 CACNA2D1P54289 1103 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 EPHB1P54762 984 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 NME3Q13232 169 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 CCNIQ14094 377 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 DPYSQ14117 519 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 KIAA0319Q5VV43 1072 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 SLC27A1Q6PCB7 646 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 NPWQ8N729 165 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 AGR3Q8TD06 166 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 NT5C3BQ969T7 300 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 MFSD3Q96ES6 412 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 EPAS1Q99814 870 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 GCOM2Q9BZD3 368 aaPredicted RBP11.21□□□□□ -0.62
C9orf3-214ENST00000473778 PPP1R12CQ9BZL4 782 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 EIF2B3Q9NR50 452 aaKnown RBP11.21□□□□□ -0.62
C9orf3-214ENST00000473778 ADAMTS6Q9UKP5 1117 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 COL1A2P08123 1366 aa11.21□□□□□ -0.62
C9orf3-214ENST00000473778 SMIM28A0A1B0GU29 152 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ZCWPW2A0A1B0GU75 182 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ARHGAP42A6NI28 874 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 HACD1B0YJ81 288 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 DCLK1O15075 740 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 LTFP02788 710 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
C9orf3-214ENST00000473778 RALBP11234 206 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms